Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K04
(855 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 327 8e-90
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 324 7e-89
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 277 8e-75
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 6e-51
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 162 4e-40
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 103 1e-22
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 9e-09
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.6
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.8
SB_30795| Best HMM Match : Epimerase (HMM E-Value=0) 29 3.6
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.6
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.8
SB_16673| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.8
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 4.8
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 6.4
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 28 8.4
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 327 bits (803), Expect = 8e-90
Identities = 155/189 (82%), Positives = 171/189 (90%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTISDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 390
YVAF+DTERLIGDAAKNQVAMNP NT+ DAKRLIGRKF+D V DM HWPF V+ +G +
Sbjct: 41 YVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGER 100
Query: 391 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 570
PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKD
Sbjct: 101 PKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKD 160
Query: 571 AGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVK 750
AGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIEDGIFEVK
Sbjct: 161 AGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVK 220
Query: 751 STAGDTHLG 777
STAGDTHLG
Sbjct: 221 STAGDTHLG 229
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 132 YSCVGVFQHGKVEIIANDQGQQ 197
YSCVGVFQHGKVEIIANDQG +
Sbjct: 15 YSCVGVFQHGKVEIIANDQGNR 36
Score = 36.3 bits (80), Expect = 0.032
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +2
Query: 779 GEDFDNRMVNHFVQEFXKEIQK 844
GEDFDN+MV+HFV++F ++ +K
Sbjct: 230 GEDFDNKMVDHFVKQFKQKYKK 251
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2
Query: 89 MAKAPAVGIDLGTT 130
MAK PAVGIDLGTT
Sbjct: 1 MAKTPAVGIDLGTT 14
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 324 bits (795), Expect = 7e-89
Identities = 154/190 (81%), Positives = 174/190 (91%), Gaps = 1/190 (0%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTISDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 390
YV FTDTERL+GDAAKNQVA+NP NTI DAKRLIGR+++DATVQ+DMK WPF+++SD K
Sbjct: 41 YVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNK 100
Query: 391 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 570
PKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKD
Sbjct: 101 PKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKD 160
Query: 571 AGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEV 747
AGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+DG +FEV
Sbjct: 161 AGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEV 220
Query: 748 KSTAGDTHLG 777
KSTAGDTHLG
Sbjct: 221 KSTAGDTHLG 230
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 132 YSCVGVFQHGKVEIIANDQGQQ 197
YSCVGVFQ+GKVEIIANDQG +
Sbjct: 15 YSCVGVFQNGKVEIIANDQGNR 36
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 779 GEDFDNRMVNHFVQEFXKEIQK 844
GEDFDNR+VNHFV EF ++ +K
Sbjct: 231 GEDFDNRLVNHFVAEFKRKYKK 252
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 89 MAKAPAVGIDLGTT 130
M KAPA+GIDLGTT
Sbjct: 1 MGKAPAIGIDLGTT 14
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 277 bits (679), Expect = 8e-75
Identities = 133/190 (70%), Positives = 160/190 (84%), Gaps = 1/190 (0%)
Frame = +1
Query: 211 YVAFTDT-ERLIGDAAKNQVAMNPNNTISDAKRLIGRKFEDATVQADMKHWPFEVVSDGG 387
YVAFT+ ERLIGD AKNQ+ NP NT+ DAKRLIGR ++D +VQ D+K +PF+VV
Sbjct: 738 YVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNK 797
Query: 388 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 567
KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQATK
Sbjct: 798 KPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Query: 568 DAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 747
DAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++G+FEV
Sbjct: 858 DAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEV 916
Query: 748 KSTAGDTHLG 777
+T GDTHLG
Sbjct: 917 VATNGDTHLG 926
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +3
Query: 132 YSCVGVFQHGKVEIIANDQGQQ 197
YSCVGVF++G+VEIIANDQG +
Sbjct: 712 YSCVGVFKNGRVEIIANDQGNR 733
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 198 bits (482), Expect = 6e-51
Identities = 97/112 (86%), Positives = 103/112 (91%)
Frame = +1
Query: 442 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 621
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 622 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 777
AAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLG
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLG 322
Score = 182 bits (444), Expect = 2e-46
Identities = 97/147 (65%), Positives = 107/147 (72%), Gaps = 25/147 (17%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTISDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 390
YVAFTD ERL+GDAAKNQVAMNP NTI DAKRLIGR+F+D V+ DMKHW FEVV++ G+
Sbjct: 41 YVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGR 100
Query: 391 PKIKVAYKGEDKTFFPEEV-------------------------SSMVLTKMKETAEAYL 495
PK+KV YKGE KTFF EEV SSMVL KMKETAEAYL
Sbjct: 101 PKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYL 160
Query: 496 GKTVQNAVITVPAYFNDSQRQATKDAG 576
G V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 161 GCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 132 YSCVGVFQHGKVEIIANDQGQQ 197
YSCVGVFQHGKVEIIANDQG +
Sbjct: 15 YSCVGVFQHGKVEIIANDQGNR 36
Score = 31.9 bits (69), Expect = 0.68
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 779 GEDFDNRMVNHFVQEFXKEIQK 844
GEDFDN MV+ FV++F ++ +K
Sbjct: 323 GEDFDNNMVDFFVKQFKQKYKK 344
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 89 MAKAPAVGIDLGTT 130
M KAPA+GIDLGTT
Sbjct: 1 MTKAPAIGIDLGTT 14
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 162 bits (393), Expect = 4e-40
Identities = 88/189 (46%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Frame = +1
Query: 214 VAFTDTERLIGDAAKNQVAMNPNNTISDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GK 390
VAFTD L+G+ A +Q +NP NTI DAKR IG+ F + K + F V +D G
Sbjct: 71 VAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGN 130
Query: 391 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 570
V KG PEE+ V+ K++ AE L TV AV++VPA F+ QR AT
Sbjct: 131 AGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVK 190
Query: 571 AGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVK 750
A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+ G+F
Sbjct: 191 AASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTM 249
Query: 751 STAGDTHLG 777
+ AG+ LG
Sbjct: 250 AMAGNNRLG 258
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 130 bits (315), Expect = 1e-30
Identities = 71/172 (41%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
Frame = +1
Query: 274 NPNNTISDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 450
N NTIS KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 451 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 630
+M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237
Query: 631 IAYGLDKKG---TGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 777
+AYG+ K+ RNV+ D+G + V I G +V STA + +LG
Sbjct: 238 LAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLG 289
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 103 bits (248), Expect = 1e-22
Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 26/118 (22%)
Frame = +1
Query: 397 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 576
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 577 TISGLN------------------------VLRIINEPTAAAIAYGLDKK--GTGERN 672
TI+GL+ VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Frame = +1
Query: 391 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 570
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 571 AGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL 720
A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +I+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIV 180
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 58.0 bits (134), Expect = 9e-09
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +1
Query: 673 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 777
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LG
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLG 36
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 673 VLIFDLGGGTFDVSILTIEDGIFEVK 750
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 622 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGR*GL*QSH 801
A A L +G E + D G GT VS + +E+G +++ D H+
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPFTAKA 1564
Query: 802 GQPLCP 819
G+P+ P
Sbjct: 1565 GRPVDP 1570
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 679 IFDLGGGTFDVSILTIEDGIFEV 747
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_30795| Best HMM Match : Epimerase (HMM E-Value=0)
Length = 869
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 56 RTSNKTD*KYKMAKAPAVGIDLGTTXLLRWCLPAREGG 169
R++ K+D +K KAP G G + RW PA E G
Sbjct: 558 RSAEKSDAIHKEKKAPRGGRSGGPSQRKRWTAPAEEDG 595
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 770 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 654
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 295 RILCCWGSSPPGSWRH 248
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_16673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 529
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 740 SR*NPPPATPTWXGEDFDNRMV 805
SR NPPPA TW +D DN+ V
Sbjct: 240 SRGNPPPAV-TWSWKDIDNKTV 260
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -1
Query: 756 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 589
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 588 ---ARDGTC 571
AR TC
Sbjct: 345 VYNARISTC 353
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 295 RILCCWGSSPPGSWRH 248
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +1
Query: 457 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 606
V K T+E Y+G T + NA +T+P YF + +K G G+ +
Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051
Query: 607 INEPTAAAIAYGLDKKGTG 663
+++ I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 686 TSAAVPSTCPSLPSRMVSSR*NPPPATP 769
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 28.7 bits (61), Expect = 6.4
Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 6/198 (3%)
Frame = -2
Query: 788 SPHLPKWVSPAVDFTSKIPSSMVRMDTSKVPPPR--SKISTFRSPVPFLSRP*AIAAAVG 615
SP++ ++ + T +PS+ V +T+ +P P S +T SP +++ + ++V
Sbjct: 84 SPNVTINMTREANITMILPSTSVPYNTTLIPAPNATSTAATTMSP-SYVANMTTLDSSVS 142
Query: 614 SLMIRRTFKPEMVPASFVACL*ESLKYAGTVI-TAFCTVLPR*ASAVSFIFVSTMELTSS 438
+ R + ++P+ + L Y TVI T T L + S + VS + TSS
Sbjct: 143 --LTRSSLSTTLIPSISTSI----LPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSS 196
Query: 437 GKKVLSSPLYATLILGLPPSLTTSKGQCFMSACT--VASSNLRPMRRLAS-DIVLLGFIA 267
+ + + + +++ L + + T + + T V + + P + S ++ +
Sbjct: 197 IESTIMASVASSIQLNITSNTTMAVNDTLRTTSTSAVFPTTITPSPNITSYPSLMTSAVG 256
Query: 266 TWFLAASPMRRSVSVNAT 213
+ A S + S + NAT
Sbjct: 257 NFTSATSVVFDSTTPNAT 274
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 35 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 121
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -2
Query: 485 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 306
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 305 RLASDIVL 282
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 253 AKNQVAMNPNNTISDAKRLIGRKFEDATVQAD 348
AKNQ+ NP N + + L FED+ ++ D
Sbjct: 429 AKNQIGQNPTNHAKNQRYLKSIVFEDSLIRND 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,432,601
Number of Sequences: 59808
Number of extensions: 601468
Number of successful extensions: 1872
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1862
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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