BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_K01
(1035 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21123-1|AAA85120.1| 684|Drosophila melanogaster ena polypeptid... 33 0.85
BT004488-1|AAO42652.1| 687|Drosophila melanogaster LD23655p pro... 33 0.85
AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p pro... 33 0.85
AE013599-2829|AAM68439.1| 829|Drosophila melanogaster CG15112-P... 33 0.85
AE013599-2828|AAX52697.1| 684|Drosophila melanogaster CG15112-P... 33 0.85
AE013599-2827|AAM68438.2| 684|Drosophila melanogaster CG15112-P... 33 0.85
AE013599-2826|AAF57598.2| 684|Drosophila melanogaster CG15112-P... 33 0.85
AE013599-2825|AAX52696.1| 687|Drosophila melanogaster CG15112-P... 33 0.85
BT003763-1|AAO41442.1| 652|Drosophila melanogaster RE39251p pro... 31 3.4
AY069625-1|AAL39770.1| 268|Drosophila melanogaster LD39545p pro... 31 3.4
AE014296-964|AAN12098.1| 682|Drosophila melanogaster CG10625-PC... 31 3.4
AE014296-963|AAF50773.2| 682|Drosophila melanogaster CG10625-PB... 31 3.4
AE014296-962|AAN12097.1| 268|Drosophila melanogaster CG10625-PD... 31 3.4
AE014296-961|AAN12096.1| 268|Drosophila melanogaster CG10625-PA... 31 3.4
V00200-1|CAA23486.2| 469|Drosophila melanogaster collagen protein. 30 6.0
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 30 6.0
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 30 6.0
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 30 6.0
BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p pro... 30 6.0
AE014296-862|AAF47912.1| 707|Drosophila melanogaster CG13722-PA... 30 6.0
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 30 6.0
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 30 6.0
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 30 6.0
AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-P... 30 6.0
AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p pro... 29 7.9
AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA... 29 7.9
AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-P... 29 7.9
AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein. 29 7.9
>U21123-1|AAA85120.1| 684|Drosophila melanogaster ena polypeptide
protein.
Length = 684
Score = 32.7 bits (71), Expect = 0.85
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +2
Query: 326 SQGXGGXGXAXXXPPPP--XGGXFXXXKXXXXGGXLXRG-PXXXRXXGXPPPXXFXPPXX 496
SQG G A PPPP GG + G P G PPP PP
Sbjct: 397 SQGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 456
Query: 497 XTXXXXGXXFXXSXPPPXXXXPPPP 571
+ PPP PPPP
Sbjct: 457 GGGPPPAPGGPGAPPPP----PPPP 477
>BT004488-1|AAO42652.1| 687|Drosophila melanogaster LD23655p
protein.
Length = 687
Score = 32.7 bits (71), Expect = 0.85
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +2
Query: 326 SQGXGGXGXAXXXPPPP--XGGXFXXXKXXXXGGXLXRG-PXXXRXXGXPPPXXFXPPXX 496
SQG G A PPPP GG + G P G PPP PP
Sbjct: 400 SQGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 459
Query: 497 XTXXXXGXXFXXSXPPPXXXXPPPP 571
+ PPP PPPP
Sbjct: 460 GGGPPPAPGGPGAPPPP----PPPP 480
>AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p
protein.
Length = 831
Score = 32.7 bits (71), Expect = 0.85
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +2
Query: 326 SQGXGGXGXAXXXPPPP--XGGXFXXXKXXXXGGXLXRG-PXXXRXXGXPPPXXFXPPXX 496
SQG G A PPPP GG + G P G PPP PP
Sbjct: 543 SQGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 602
Query: 497 XTXXXXGXXFXXSXPPPXXXXPPPP 571
+ PPP PPPP
Sbjct: 603 GGGPPPAPGGPGAPPPP----PPPP 623
>AE013599-2829|AAM68439.1| 829|Drosophila melanogaster CG15112-PB,
isoform B protein.
Length = 829
Score = 32.7 bits (71), Expect = 0.85
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +2
Query: 326 SQGXGGXGXAXXXPPPP--XGGXFXXXKXXXXGGXLXRG-PXXXRXXGXPPPXXFXPPXX 496
SQG G A PPPP GG + G P G PPP PP
Sbjct: 542 SQGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 601
Query: 497 XTXXXXGXXFXXSXPPPXXXXPPPP 571
+ PPP PPPP
Sbjct: 602 GGGPPPAPGGPGAPPPP----PPPP 622
>AE013599-2828|AAX52697.1| 684|Drosophila melanogaster CG15112-PE,
isoform E protein.
Length = 684
Score = 32.7 bits (71), Expect = 0.85
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +2
Query: 326 SQGXGGXGXAXXXPPPP--XGGXFXXXKXXXXGGXLXRG-PXXXRXXGXPPPXXFXPPXX 496
SQG G A PPPP GG + G P G PPP PP
Sbjct: 397 SQGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 456
Query: 497 XTXXXXGXXFXXSXPPPXXXXPPPP 571
+ PPP PPPP
Sbjct: 457 GGGPPPAPGGPGAPPPP----PPPP 477
>AE013599-2827|AAM68438.2| 684|Drosophila melanogaster CG15112-PC,
isoform C protein.
Length = 684
Score = 32.7 bits (71), Expect = 0.85
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +2
Query: 326 SQGXGGXGXAXXXPPPP--XGGXFXXXKXXXXGGXLXRG-PXXXRXXGXPPPXXFXPPXX 496
SQG G A PPPP GG + G P G PPP PP
Sbjct: 397 SQGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 456
Query: 497 XTXXXXGXXFXXSXPPPXXXXPPPP 571
+ PPP PPPP
Sbjct: 457 GGGPPPAPGGPGAPPPP----PPPP 477
>AE013599-2826|AAF57598.2| 684|Drosophila melanogaster CG15112-PA,
isoform A protein.
Length = 684
Score = 32.7 bits (71), Expect = 0.85
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +2
Query: 326 SQGXGGXGXAXXXPPPP--XGGXFXXXKXXXXGGXLXRG-PXXXRXXGXPPPXXFXPPXX 496
SQG G A PPPP GG + G P G PPP PP
Sbjct: 397 SQGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 456
Query: 497 XTXXXXGXXFXXSXPPPXXXXPPPP 571
+ PPP PPPP
Sbjct: 457 GGGPPPAPGGPGAPPPP----PPPP 477
>AE013599-2825|AAX52696.1| 687|Drosophila melanogaster CG15112-PD,
isoform D protein.
Length = 687
Score = 32.7 bits (71), Expect = 0.85
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +2
Query: 326 SQGXGGXGXAXXXPPPP--XGGXFXXXKXXXXGGXLXRG-PXXXRXXGXPPPXXFXPPXX 496
SQG G A PPPP GG + G P G PPP PP
Sbjct: 400 SQGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 459
Query: 497 XTXXXXGXXFXXSXPPPXXXXPPPP 571
+ PPP PPPP
Sbjct: 460 GGGPPPAPGGPGAPPPP----PPPP 480
>BT003763-1|AAO41442.1| 652|Drosophila melanogaster RE39251p
protein.
Length = 652
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/95 (26%), Positives = 26/95 (27%)
Frame = +2
Query: 287 PGKGGPXXXRVPFSQGXGGXGXAXXXPPPPXGGXFXXXKXXXXGGXLXRGPXXXRXXGXP 466
PG GP + P G G P PP G G GP G P
Sbjct: 529 PGPPGPPGPKGPTKPGPFGPPGPPGPPGPP--GPTRPGPYGPPGPPGPTGPTRPGPPGPP 586
Query: 467 PPXXFXPPXXXTXXXXGXXFXXSXPPPXXXXPPPP 571
P PP G PP P PP
Sbjct: 587 GPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPP 621
>AY069625-1|AAL39770.1| 268|Drosophila melanogaster LD39545p
protein.
Length = 268
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/95 (26%), Positives = 26/95 (27%)
Frame = +2
Query: 287 PGKGGPXXXRVPFSQGXGGXGXAXXXPPPPXGGXFXXXKXXXXGGXLXRGPXXXRXXGXP 466
PG GP + P G G P PP G G GP G P
Sbjct: 145 PGPPGPPGPKGPTKPGPFGPPGPPGPPGPP--GPTRPGPYGPPGPPGPTGPTRPGPPGPP 202
Query: 467 PPXXFXPPXXXTXXXXGXXFXXSXPPPXXXXPPPP 571
P PP G PP P PP
Sbjct: 203 GPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPP 237
>AE014296-964|AAN12098.1| 682|Drosophila melanogaster CG10625-PC,
isoform C protein.
Length = 682
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/95 (26%), Positives = 26/95 (27%)
Frame = +2
Query: 287 PGKGGPXXXRVPFSQGXGGXGXAXXXPPPPXGGXFXXXKXXXXGGXLXRGPXXXRXXGXP 466
PG GP + P G G P PP G G GP G P
Sbjct: 559 PGPPGPPGPKGPTKPGPFGPPGPPGPPGPP--GPTRPGPYGPPGPPGPTGPTRPGPPGPP 616
Query: 467 PPXXFXPPXXXTXXXXGXXFXXSXPPPXXXXPPPP 571
P PP G PP P PP
Sbjct: 617 GPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPP 651
>AE014296-963|AAF50773.2| 682|Drosophila melanogaster CG10625-PB,
isoform B protein.
Length = 682
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/95 (26%), Positives = 26/95 (27%)
Frame = +2
Query: 287 PGKGGPXXXRVPFSQGXGGXGXAXXXPPPPXGGXFXXXKXXXXGGXLXRGPXXXRXXGXP 466
PG GP + P G G P PP G G GP G P
Sbjct: 559 PGPPGPPGPKGPTKPGPFGPPGPPGPPGPP--GPTRPGPYGPPGPPGPTGPTRPGPPGPP 616
Query: 467 PPXXFXPPXXXTXXXXGXXFXXSXPPPXXXXPPPP 571
P PP G PP P PP
Sbjct: 617 GPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPP 651
>AE014296-962|AAN12097.1| 268|Drosophila melanogaster CG10625-PD,
isoform D protein.
Length = 268
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/95 (26%), Positives = 26/95 (27%)
Frame = +2
Query: 287 PGKGGPXXXRVPFSQGXGGXGXAXXXPPPPXGGXFXXXKXXXXGGXLXRGPXXXRXXGXP 466
PG GP + P G G P PP G G GP G P
Sbjct: 145 PGPPGPPGPKGPTKPGPFGPPGPPGPPGPP--GPTRPGPYGPPGPPGPTGPTRPGPPGPP 202
Query: 467 PPXXFXPPXXXTXXXXGXXFXXSXPPPXXXXPPPP 571
P PP G PP P PP
Sbjct: 203 GPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPP 237
>AE014296-961|AAN12096.1| 268|Drosophila melanogaster CG10625-PA,
isoform A protein.
Length = 268
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/95 (26%), Positives = 26/95 (27%)
Frame = +2
Query: 287 PGKGGPXXXRVPFSQGXGGXGXAXXXPPPPXGGXFXXXKXXXXGGXLXRGPXXXRXXGXP 466
PG GP + P G G P PP G G GP G P
Sbjct: 145 PGPPGPPGPKGPTKPGPFGPPGPPGPPGPP--GPTRPGPYGPPGPPGPTGPTRPGPPGPP 202
Query: 467 PPXXFXPPXXXTXXXXGXXFXXSXPPPXXXXPPPP 571
P PP G PP P PP
Sbjct: 203 GPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPP 237
>V00200-1|CAA23486.2| 469|Drosophila melanogaster collagen protein.
Length = 469
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 221 GSXGXPXQXXSPG*RGESGVXFPGKGGP 304
G G P + PG RGE G+ PG GP
Sbjct: 70 GLRGIPGRNGQPGPRGEPGISRPGPMGP 97
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 221 GSXGXPXQXXSPG*RGESGVXFPGKGGP 304
G G P + PG RGE G+ PG GP
Sbjct: 831 GLRGIPGRNGQPGPRGEPGISRPGPMGP 858
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 221 GSXGXPXQXXSPG*RGESGVXFPGKGGP 304
G G P + PG RGE G+ PG GP
Sbjct: 831 GLRGIPGRNGQPGPRGEPGISRPGPMGP 858
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 221 GSXGXPXQXXSPG*RGESGVXFPGKGGP 304
G G P + PG RGE G+ PG GP
Sbjct: 831 GLRGIPGRNGQPGPRGEPGISRPGPMGP 858
>BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p
protein.
Length = 538
Score = 29.9 bits (64), Expect = 6.0
Identities = 21/57 (36%), Positives = 23/57 (40%)
Frame = +2
Query: 221 GSXGXPXQXXSPG*RGESGVXFPGKGGPXXXRVPFSQGXGGXGXAXXXPPPPXGGXF 391
G G P +PG G G F G+GG G GG G A P P GG F
Sbjct: 349 GGGGAPGAPGAPGSPGGGG--FGGQGGGGGF-----GGGGGRGGAPGAPGSPGGGGF 398
>AE014296-862|AAF47912.1| 707|Drosophila melanogaster CG13722-PA
protein.
Length = 707
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 943 PPVXXRDAPPPXPXXDXEXPPPXV 1014
PPV APPP P PPP V
Sbjct: 559 PPVTTTQAPPPPPPTSKYLPPPQV 582
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 943 PPVXXRDAPPPXPXXDXEXPPPXV 1014
PPV APPP P PPP V
Sbjct: 607 PPVTTTQAPPPPPPTSKYLPPPQV 630
Score = 29.5 bits (63), Expect = 7.9
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +2
Query: 539 PPPXXXXPPPPXXTRXXXKXXAWRGAKNXPPXGAXVXLPPPXFXXGXXSPAPSV 700
P P PPP + A PP LPPP G P P++
Sbjct: 179 PKPAIPFPPPTAPPQKYLPPVTTTPAPPPPPPPTKKYLPPPQVKQGYDYPKPAI 232
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 221 GSXGXPXQXXSPG*RGESGVXFPGKGGP 304
G G P + PG RGE G+ PG GP
Sbjct: 831 GLRGIPGRNGQPGPRGEPGISRPGPMGP 858
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 221 GSXGXPXQXXSPG*RGESGVXFPGKGGP 304
G G P + PG RGE G+ PG GP
Sbjct: 831 GLRGIPGRNGQPGPRGEPGISRPGPMGP 858
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 221 GSXGXPXQXXSPG*RGESGVXFPGKGGP 304
G G P + PG RGE G+ PG GP
Sbjct: 831 GLRGIPGRNGQPGPRGEPGISRPGPMGP 858
>AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-PA,
isoform A protein.
Length = 610
Score = 29.9 bits (64), Expect = 6.0
Identities = 21/57 (36%), Positives = 23/57 (40%)
Frame = +2
Query: 221 GSXGXPXQXXSPG*RGESGVXFPGKGGPXXXRVPFSQGXGGXGXAXXXPPPPXGGXF 391
G G P +PG G G F G+GG G GG G A P P GG F
Sbjct: 421 GGGGAPGAPGAPGSPGGGG--FGGQGGGGGF-----GGGGGRGGAPGAPGSPGGGGF 470
>AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p
protein.
Length = 993
Score = 29.5 bits (63), Expect = 7.9
Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +2
Query: 365 PPPPXGGXFXXXKXXXXGGXLXRGPXXXRXXGXPPP--XXFXPPXXXTXXXXGXXFXXSX 538
PPPP G + G P G PPP + PP + +
Sbjct: 436 PPPPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPS-----GNYGPPP 490
Query: 539 PPPXXXXPPPP 571
PP PPPP
Sbjct: 491 PPSGNYGPPPP 501
>AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA
protein.
Length = 993
Score = 29.5 bits (63), Expect = 7.9
Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +2
Query: 365 PPPPXGGXFXXXKXXXXGGXLXRGPXXXRXXGXPPP--XXFXPPXXXTXXXXGXXFXXSX 538
PPPP G + G P G PPP + PP + +
Sbjct: 436 PPPPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPS-----GNYGPPP 490
Query: 539 PPPXXXXPPPP 571
PP PPPP
Sbjct: 491 PPSGNYGPPPP 501
>AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-PA
protein.
Length = 1644
Score = 29.5 bits (63), Expect = 7.9
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 895 RLPSQTXRXXAVDTPXPP---VXXRDAPPPXPXXDXEXPPP 1008
R PSQ A TP PP + PPP P + PPP
Sbjct: 257 RKPSQPVGVSAKTTPPPPPPPMAPAAPPPPPPPINGAAPPP 297
>AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein.
Length = 1644
Score = 29.5 bits (63), Expect = 7.9
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 895 RLPSQTXRXXAVDTPXPP---VXXRDAPPPXPXXDXEXPPP 1008
R PSQ A TP PP + PPP P + PPP
Sbjct: 257 RKPSQPVGVSAKTTPPPPPPPMAPAAPPPPPPPINGAAPPP 297
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,512,691
Number of Sequences: 53049
Number of extensions: 989926
Number of successful extensions: 6185
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5257
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5269947732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -