Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_J24
(851 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 194 6e-50
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 110 1e-24
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 97 2e-20
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 97 2e-20
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 95 5e-20
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 89 3e-18
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 84 1e-16
At5g13650.2 68418.m01585 elongation factor family protein contai... 83 2e-16
At5g13650.1 68418.m01584 elongation factor family protein contai... 83 2e-16
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 80 2e-15
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 69 5e-12
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 69 5e-12
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 46 2e-05
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 37 0.015
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 36 0.026
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 36 0.045
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 36 0.045
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 36 0.045
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 36 0.045
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 33 0.18
At4g11610.1 68417.m01859 C2 domain-containing protein contains I... 31 0.74
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 31 0.74
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 31 1.3
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 31 1.3
At2g31060.1 68415.m03790 elongation factor family protein contai... 31 1.3
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 2.2
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St... 30 2.2
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 29 3.0
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 3.0
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 3.9
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 194 bits (473), Expect = 6e-50
Identities = 104/172 (60%), Positives = 122/172 (70%)
Frame = +3
Query: 159 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIK 338
+MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR DE +R ITIK
Sbjct: 12 IMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIK 71
Query: 339 STAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALX 518
ST IS+++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVTAALR+TDGAL
Sbjct: 72 STGISLYYEMTDESLKSFTG--ARDGNE--YLINLIDSPGHVDFSSEVTAALRITDGALV 127
Query: 519 XXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTSS 674
QTETVLRQA+ ERI+P+L +NKMDR YQT S
Sbjct: 128 VVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFS 179
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 110 bits (265), Expect = 1e-24
Identities = 63/152 (41%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Frame = +3
Query: 174 RNIRNMSVIAHVDHGKSTLTDSLVSKAG--IIAGARAGETRFTDTRKDEQDRCITIKSTA 347
R +RN+ ++AHVDHGK+TL D L++ +G ++ AG+ RF D +EQ R IT+KS++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITMKSSS 66
Query: 348 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 527
IS+ + K + +NLIDSPGH+DF SEV+ A R++DGAL
Sbjct: 67 ISLKY--------------------KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVD 106
Query: 528 XXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
QT VLRQA E++ P L +NK+DR
Sbjct: 107 AVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDR 138
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 96.7 bits (230), Expect = 2e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +3
Query: 156 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 326
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 327 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 506
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 507 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
GA+ TE +R AI + + ++ +NK+DR
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDR 273
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 96.7 bits (230), Expect = 2e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +3
Query: 156 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 326
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 327 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 506
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 507 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
GA+ TE +R AI + + ++ +NK+DR
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDR 273
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 95.1 bits (226), Expect = 5e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +3
Query: 156 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET---RFTDTRKDEQDRC 326
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERN 175
Query: 327 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 506
I+IK+ +S+ E D R KS +L N++D+PG+V+FS E+TA+LR+ D
Sbjct: 176 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGNVNFSDEMTASLRLAD 220
Query: 507 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
GA+ TE +R AI + + ++ +NK+DR
Sbjct: 221 GAVFIVDAAQGVMVNTERAIRHAIQDHLPIVVVINKVDR 259
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 89.0 bits (211), Expect = 3e-18
Identities = 54/148 (36%), Positives = 80/148 (54%)
Frame = +3
Query: 180 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMF 359
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D K +++R IT+K+ +MF
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLD--KLQRERGITVKAQTATMF 122
Query: 360 FELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXX 539
+E + +D + G+L+NLID+PGHVDFS EV+ +L GAL
Sbjct: 123 YENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Query: 540 XXXQTETVLRQAIAERIKPILFMNKMDR 623
QT A + + +NK+D+
Sbjct: 172 VQAQTVANFYLAFEANLTIVPVINKIDQ 199
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 84.2 bits (199), Expect = 1e-16
Identities = 55/148 (37%), Positives = 76/148 (51%)
Frame = +3
Query: 177 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 356
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R ITIK A M
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQAARM 143
Query: 357 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 536
+ E+ F +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 144 RYVYEDTP----------------FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQ 187
Query: 537 XXXXQTETVLRQAIAERIKPILFMNKMD 620
QT + A+ ++ I +NK+D
Sbjct: 188 GVEAQTLANVYLALENNLEIIPVLNKID 215
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 83.4 bits (197), Expect = 2e-16
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +3
Query: 162 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 341
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S
Sbjct: 77 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 136
Query: 342 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 521
S+ + K +N+ID+PGH DF EV L + DG L
Sbjct: 137 KNTSITY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLV 176
Query: 522 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
QT VL++A+ ++ +NK+DR
Sbjct: 177 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDR 210
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 83.4 bits (197), Expect = 2e-16
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +3
Query: 162 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 341
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 135
Query: 342 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 521
S+ + K +N+ID+PGH DF EV L + DG L
Sbjct: 136 KNTSITY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLV 175
Query: 522 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
QT VL++A+ ++ +NK+DR
Sbjct: 176 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDR 209
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 80.2 bits (189), Expect = 2e-15
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Frame = +3
Query: 174 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITIKS 341
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R ITI S
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITITS 151
Query: 342 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 521
A + F++ IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 152 AATTTFWDKHR--------------------INIIDTPGHVDFTLEVERALRVLDGAICL 191
Query: 522 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
Q+ETV RQA + I F+NKMDR
Sbjct: 192 FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDR 225
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 68.5 bits (160), Expect = 5e-12
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +3
Query: 162 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 326
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 327 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 506
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 507 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
GA+ Q+ TV RQ + + F+NK+DR
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 68.5 bits (160), Expect = 5e-12
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +3
Query: 162 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 326
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 327 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 506
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 507 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
GA+ Q+ TV RQ + + F+NK+DR
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 1/157 (0%)
Frame = +3
Query: 156 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITI 335
G ++K+ N+ I HVDHGK+TLT +L I + A + D +E+ R ITI
Sbjct: 71 GKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITI 130
Query: 336 KSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 515
+ + +E E + +D PGH D+ + DGA+
Sbjct: 131 NTATVE--YETENRHYAH------------------VDCPGHADYVKNMITGAAQMDGAI 170
Query: 516 XXXXXXXXXXXQT-ETVLRQAIAERIKPILFMNKMDR 623
QT E +L ++F+NK D+
Sbjct: 171 LVVSGADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQ 207
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/110 (25%), Positives = 49/110 (44%)
Frame = +3
Query: 186 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 365
N++++ HVD GKSTL+ L+ G R + + K+ + + + A ++
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLG-----RISQKQMHKYEKEAKLQGKGSFAYAWALDES 295
Query: 366 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 515
EE++ + K + L+DSPGH DF + A D A+
Sbjct: 296 AEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAI 345
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 36.3 bits (80), Expect = 0.026
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 1/159 (0%)
Frame = +3
Query: 147 RSXGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRC 326
RS + + N+ I HVDHGK+TLT ++ A+A D +E+ R
Sbjct: 56 RSMATFTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRG 115
Query: 327 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 506
ITI + + +E ++ +D PGH D+ + D
Sbjct: 116 ITIATAHVE--YETAKRHYAH------------------VDCPGHADYVKNMITGAAQMD 155
Query: 507 GALXXXXXXXXXXXQTETVLRQAIAERIKPIL-FMNKMD 620
G + QT+ + A + ++ F+NK+D
Sbjct: 156 GGILVVSGPDGPMPQTKEHILLARQVGVPSLVCFLNKVD 194
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 35.5 bits (78), Expect = 0.045
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 162 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 341
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 342 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 515
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.045
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 162 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 341
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 342 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 515
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.045
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 162 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 341
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 342 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 515
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.045
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 162 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 341
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 342 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 515
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 444 IDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
+D+PGH F + RVTD A+ QT + A A + ++ +NK+D+
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAINKIDK 616
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 189 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 290
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At4g11610.1 68417.m01859 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1011
Score = 31.5 bits (68), Expect = 0.74
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = -1
Query: 326 ATVLFVLTRVSETGLSGSRTSNDTGLGNQRVREG*LAVIDVGDHRHVADIPLLVHHPTGS 147
ATVL V V + G G + + D +G R+R L+ ++ G + PLLV HPTG
Sbjct: 666 ATVLTV--GVFDNGQLGEKGNRDVKIGKIRIR---LSTLETG-RIYTHSYPLLVLHPTGV 719
Query: 146 R------LXVKFTILDGL*FLFY*TNYHTPAMAY 63
+ + V+FT + L+ + P M Y
Sbjct: 720 KKMGELHMAVRFTCISFANMLYQYSKPLLPKMHY 753
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +3
Query: 420 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 599
+ G I +D+PGH FS VTD + QT + A + + +
Sbjct: 265 DSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVPVV 324
Query: 600 LFMNKMDR 623
+ +NK D+
Sbjct: 325 VAINKCDK 332
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 189 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 281
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 562 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 464
T S T PD ST T APSVT+ + + EK+
Sbjct: 383 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 562 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 464
T S T PD ST T APSVT+ + + EK+
Sbjct: 644 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 498 VTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 623
+ +GA+ QT+ VL +A+ ++PIL +NK+DR
Sbjct: 1 MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDR 42
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 199 SPTSITASQPSRTRWFPRPVSLLVRE 276
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
Strong similarity to beta-keto-Coa synthase gb|U37088
from Simmondsia chinensis, GI:4091810
Length = 528
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -1
Query: 584 LGNSLTQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREIN 462
L N + C S Y HTV HKGS D +C ++RE N
Sbjct: 299 LSNRSSDRCRSKY-QLIHTVRTHKGS-DDNAFNCVYQREDN 337
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 217 ASQPSRTRWFPRPVSLLVREPERPVSLTRVR-TNKTVASPLNLRPSLCSSSLKRK 378
A Q S + W PR S + P++ + T+ V+ N PS+ S LKRK
Sbjct: 695 AKQSSSSPWVPRHTSSVAHPPKQENYIKHHNSTSSRVSKESNRTPSVSSYPLKRK 749
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 435 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNK 614
I +ID+PGH F++ + + D A+ QT L +K I+ +NK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKFIIALNK 617
Query: 615 MDR 623
+DR
Sbjct: 618 VDR 620
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 199 SPTSITASQPSRTRWFPRPVSLLVRE 276
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,186,023
Number of Sequences: 28952
Number of extensions: 337674
Number of successful extensions: 1040
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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