Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_J23
(847 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF216972-2|AAF76751.1| 138|Homo sapiens p15 protein protein. 32 3.0
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 31 4.0
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 31 4.0
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.0
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.0
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.0
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.0
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.0
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.0
AL133320-2|CAI21783.1| 281|Homo sapiens chromosome 1 open readi... 31 6.9
X94552-1|CAA64245.1| 915|Homo sapiens glutamate receptor protein. 30 9.2
U92458-1|AAB51763.1| 915|Homo sapiens metabotropic glutamate re... 30 9.2
AF458054-1|AAM47559.1| 906|Homo sapiens metabotropic glutamate ... 30 9.2
AF458053-1|AAM47558.1| 911|Homo sapiens metabotropic glutamate ... 30 9.2
AF458052-1|AAM47557.1| 924|Homo sapiens metabotropic glutamate ... 30 9.2
AB209214-1|BAD92451.1| 656|Homo sapiens Metabotropic glutamate ... 30 9.2
>AF216972-2|AAF76751.1| 138|Homo sapiens p15 protein protein.
Length = 138
Score = 31.9 bits (69), Expect = 3.0
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 72 GQAPQLRDQR--GPEVSVLRPAVHRAVQAAQAPLPWKADRAC*LLGRGEYRQRGTVFGLP 245
G+ P D+R GP+ S +P V + ++ ++ P P + R G R+ G
Sbjct: 30 GEGPGAGDRRREGPDRSPRQPPVSQRLRPSRTPAPRR--RRALHPPSGRDREEEEEMGYA 87
Query: 246 QLLQREPTVPRGQQRARHGSQDPQQDPGARRKRLRHPG 359
+ P PR + AR G ++D GARRK +R G
Sbjct: 88 R-----PGPPRVRACARGGRGGAREDFGARRKHVRGLG 120
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 310 SCDPCRARC*-PLGTVGSRCSSCGSPNT 230
+CDP RC P T+G +CS C +PNT
Sbjct: 1022 NCDPKTGRCICPPNTIGEKCSKC-APNT 1048
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 310 SCDPCRARC*-PLGTVGSRCSSCGSPNT 230
+CDP RC P T+G +CS C +PNT
Sbjct: 1022 NCDPKTGRCICPPNTIGEKCSKC-APNT 1048
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 310 SCDPCRARC*-PLGTVGSRCSSCGSPNT 230
+CDP RC P T+G +CS C +PNT
Sbjct: 1022 NCDPKTGRCICPPNTIGEKCSKC-APNT 1048
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 310 SCDPCRARC*-PLGTVGSRCSSCGSPNT 230
+CDP RC P T+G +CS C +PNT
Sbjct: 1022 NCDPKTGRCICPPNTIGEKCSKC-APNT 1048
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 310 SCDPCRARC*-PLGTVGSRCSSCGSPNT 230
+CDP RC P T+G +CS C +PNT
Sbjct: 1022 NCDPKTGRCICPPNTIGEKCSKC-APNT 1048
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 310 SCDPCRARC*-PLGTVGSRCSSCGSPNT 230
+CDP RC P T+G +CS C +PNT
Sbjct: 1022 NCDPKTGRCICPPNTIGEKCSKC-APNT 1048
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 310 SCDPCRARC*-PLGTVGSRCSSCGSPNT 230
+CDP RC P T+G +CS C +PNT
Sbjct: 1022 NCDPKTGRCICPPNTIGEKCSKC-APNT 1048
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 310 SCDPCRARC*-PLGTVGSRCSSCGSPNT 230
+CDP RC P T+G +CS C +PNT
Sbjct: 1022 NCDPKTGRCICPPNTIGEKCSKC-APNT 1048
>AL133320-2|CAI21783.1| 281|Homo sapiens chromosome 1 open reading
frame 141 protein.
Length = 281
Score = 30.7 bits (66), Expect = 6.9
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 773 HVRFSCAQESVDQLLDHKTRRYHXAXTS**SLPCRSX-PVDTHLKSRSIRSCLLRKATCE 597
HV F C E + R T+ + S PV+ HLKSRSIR L K T E
Sbjct: 79 HVSFKCEPEPRKSNFEKSNLRPFFIQTNVKNKESESTEPVEEHLKSRSIRPYLYLKDTTE 138
>X94552-1|CAA64245.1| 915|Homo sapiens glutamate receptor protein.
Length = 915
Score = 30.3 bits (65), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 364 CKPGCRSRFRRAPGSCWGSCDPC 296
CKPG R + ++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>U92458-1|AAB51763.1| 915|Homo sapiens metabotropic glutamate
receptor 7 protein.
Length = 915
Score = 30.3 bits (65), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 364 CKPGCRSRFRRAPGSCWGSCDPC 296
CKPG R + ++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AF458054-1|AAM47559.1| 906|Homo sapiens metabotropic glutamate
receptor 7 variant 5 protein.
Length = 906
Score = 30.3 bits (65), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 364 CKPGCRSRFRRAPGSCWGSCDPC 296
CKPG R + ++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AF458053-1|AAM47558.1| 911|Homo sapiens metabotropic glutamate
receptor 7 variant 4 protein.
Length = 911
Score = 30.3 bits (65), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 364 CKPGCRSRFRRAPGSCWGSCDPC 296
CKPG R + ++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AF458052-1|AAM47557.1| 924|Homo sapiens metabotropic glutamate
receptor 7 variant 3 protein.
Length = 924
Score = 30.3 bits (65), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 364 CKPGCRSRFRRAPGSCWGSCDPC 296
CKPG R + ++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AB209214-1|BAD92451.1| 656|Homo sapiens Metabotropic glutamate
receptor 7 variant protein.
Length = 656
Score = 30.3 bits (65), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 364 CKPGCRSRFRRAPGSCWGSCDPC 296
CKPG R + ++ CW +C+PC
Sbjct: 282 CKPGQRKKTQKGTPCCW-TCEPC 303
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,470,788
Number of Sequences: 237096
Number of extensions: 2537909
Number of successful extensions: 11100
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11086
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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