Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_J23
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 31 1.0
U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 5.5
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 28 7.3
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 28 7.3
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 28 7.3
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 28 7.3
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 9.6
AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical ... 28 9.6
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 130 PYIGQYKLLKLPFPGKLIEHVDYW---GEGSIVNGGLYSGFRNCY 255
P IG +K+LK P +LIE + YW G IV+ L + + +C+
Sbjct: 17 PVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCF 61
>U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical
protein F54D11.1 protein.
Length = 437
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 551 PTTSCPITYRNLQ*WTRTWLSSTSNFLWICFSSACRPGXYDKAVTITKSLXDDNVG 718
PTT IT+R+ T+ + + W+ + PG YD+ + I K D G
Sbjct: 170 PTTDATITFRDFLDKTQYTNTGIDAYEWMFGVNFISPGGYDENLKIIKRFGDFKPG 225
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 255 QREPTVPRGQQRARHGSQDPQQDPGARRKRLRHPGLHQG*LGQNSDAHERAHHSEQRQR 431
+R P PR ++R+ ++ P RR++ R P + + Q D R H S + +R
Sbjct: 288 RRSPEDPRERRRSPEDRTVRRRSP-ERRRQQRSPSVERRKSPQRRDERRRRHDSSENER 345
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 69 TGQAPQLRDQRGPEVSVLRPAVHRAVQAAQAPL 167
TG+ P QR S L+P+V RA AQ P+
Sbjct: 114 TGRPPPPSTQRSTATSSLKPSVTRARPVAQKPI 146
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +3
Query: 216 RQRGTVFGLPQLLQREPTVPRGQQRARHGSQDPQQDPGARRKRLRHPGLHQG*LGQNSDA 395
+QR +P+ Q+ + QQ SQ+P Q P ++ + + P L Q
Sbjct: 186 QQRRAQTQMPRHQQQYQAPQQQQQNYHQNSQNPYQQPNYQQNQYQ-PQLQQFQQNPRQQQ 244
Query: 396 HERAHHSEQRQRHYEN 443
H ++ + Q++Y+N
Sbjct: 245 HVYSNPQQGYQQNYQN 260
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +3
Query: 216 RQRGTVFGLPQLLQREPTVPRGQQRARHGSQDPQQDPGARRKRLRHPGLHQG*LGQNSDA 395
+QR +P+ Q+ + QQ SQ+P Q P ++ + + P L Q
Sbjct: 208 QQRRAQTQMPRHQQQYQAPQQQQQNYHQNSQNPYQQPNYQQNQYQ-PQLQQFQQNPRQQQ 266
Query: 396 HERAHHSEQRQRHYEN 443
H ++ + Q++Y+N
Sbjct: 267 HVYSNPQQGYQQNYQN 282
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 69 TGQAPQLRDQRGPEVSVLRPAVHRAVQAAQAPL 167
TG+ P QR S L+P+V RA AQ P+
Sbjct: 114 TGRPPPPSTQRSTATSSLKPSVTRARPVAQKPI 146
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/53 (24%), Positives = 19/53 (35%)
Frame = +3
Query: 279 GQQRARHGSQDPQQDPGARRKRLRHPGLHQG*LGQNSDAHERAHHSEQRQRHY 437
G H S GA + H G H G + H HHS+ ++ +
Sbjct: 674 GTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQH 726
>AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical
protein ZK1055.5 protein.
Length = 369
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 355 RAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGM 483
RAYI D + + I+ ARD+ R+V++ G+ + Y M
Sbjct: 134 RAYIPDGEQRDYLMNKYNIVTWHARDVLRLVDDMSGISMHYAM 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,699,279
Number of Sequences: 27780
Number of extensions: 372327
Number of successful extensions: 941
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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