Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J22
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U80839-9|AAB37922.2|  302|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81063-5|CAB02956.1|  242|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z92789-5|CAB07217.1|  397|Caenorhabditis elegans Hypothetical pr...    28   9.5  
AF022971-5|AAG23972.2|  241|Caenorhabditis elegans Hypothetical ...    28   9.5  

>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
           protein M18.5 protein.
          Length = 1134

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
 Frame = +3

Query: 216 ERGEDDLAKIGVGALDFAVYQSRH-KHLTFQDRSKRLKLHQFIAKEAGALFDSSLLEDTP 392
           + GEDD+ ++        +Y   H KHL F D +   K  +  +++A    DSS+L   P
Sbjct: 165 DTGEDDVYRVAF------IYDDDHGKHLQFSDLNMHDKEFRTYSRQASIAADSSVLIPVP 218

Query: 393 SSSTN----GTETLV--PEDNLYALMP 455
            +       G+ +++  P DNL  ++P
Sbjct: 219 HAIGGVIVLGSNSVLYKPNDNLGEVVP 245


>U80839-9|AAB37922.2|  302|Caenorhabditis elegans Hypothetical
           protein ZC204.7 protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 657 IIQAVDXKNVSRNYLMNDTVC 719
           I + +D +N+ R+Y  NDTVC
Sbjct: 253 IFEGIDVENLERDYRSNDTVC 273


>Z81063-5|CAB02956.1|  242|Caenorhabditis elegans Hypothetical
           protein F15D3.7 protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 213 SERGEDDLAKIGVGALDFAVYQSRH 287
           S R ED+L   G GAL  A+Y+S H
Sbjct: 181 SVRAEDELNGFGAGALTGAIYRSPH 205


>Z92789-5|CAB07217.1|  397|Caenorhabditis elegans Hypothetical
           protein H02I12.3 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/31 (32%), Positives = 23/31 (74%)
 Frame = -3

Query: 580 LSIIPDAVLLITAPMISSPVFTLSKKCLNLA 488
           ++I+ + ++++++P +SSPV    K C++LA
Sbjct: 56  VAILGNGLIVLSSPWLSSPVSPYLKLCISLA 86


>AF022971-5|AAG23972.2|  241|Caenorhabditis elegans Hypothetical
           protein C31B8.9 protein.
          Length = 241

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = +3

Query: 405 NGTETLVPEDNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKV 584
           N T  L+P D++   +PPF   LN D           V  G  + G ++ ++ S +   +
Sbjct: 43  NFTTELIPGDSITKFIPPFVPLLN-DYV---------VAEGYSLHGCIVRKSMSQLNTNI 92

Query: 585 LCTAGPTSRY 614
           +C    TS Y
Sbjct: 93  MCYLNNTSLY 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,577,044
Number of Sequences: 27780
Number of extensions: 355595
Number of successful extensions: 972
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)