Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J21
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   1.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   1.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   1.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   4.1  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   5.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +1

Query: 568 VSPLTTARSLNWSSPSTPAPQVSTAVVEPY--NSILTTHK 681
           +S LT+   +   SPST     S +V  PY   S LT H+
Sbjct: 690 LSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHE 729


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +1

Query: 568 VSPLTTARSLNWSSPSTPAPQVSTAVVEPY--NSILTTHK 681
           +S LT+   +   SPST     S +V  PY   S LT H+
Sbjct: 582 LSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHE 621


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +1

Query: 589 RSLNWSSPSTPAPQVSTAVVEPYNSILTTHKTLXPLTVLSWST 717
           R ++W    T A + +T   E  N++  T       T L+W T
Sbjct: 109 REISWIFLETVANENTTNCPEQKNTVTVTFTVQSDDTTLNWGT 151


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -2

Query: 480 QRACGFCPKPNLRFPFQWCSDHGHSCW 400
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 405 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 494
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 684 GFVGGEDRVVGLDDGS 637
           GF+ GE  VV  DDGS
Sbjct: 214 GFIVGEYGVVSHDDGS 229


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 292 RGTCLPAPVSLKKVLKES 239
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = +1

Query: 580  TTARSLNWSSPSTPAPQVSTAVVEPYNSILTTHKTLXPLTVLSWSTMXPSMTSAA 744
            TT  S  WSS +T     +T       +  TT  T    T  +W T   ++   A
Sbjct: 1036 TTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPA 1090


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,731
Number of Sequences: 336
Number of extensions: 4179
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)