Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J20
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.57 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   7.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   7.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   7.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.2  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 491 KCPYLSPTPSKRKFPLPSRNTSNTQYTY 574
           K P  +P+PS     LP++ TS +  TY
Sbjct: 69  KSPQGAPSPSSTPSSLPTQRTSTSNPTY 96


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 625 VDKPYEVKVKVPHSLHRLRK 684
           ++KP  VK+ V   L+R+RK
Sbjct: 484 IEKPAPVKISVQEVLNRVRK 503



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 618 LDFIRYFLFNGVRFRYVY 565
           +DF+R F FNG+   + Y
Sbjct: 624 IDFLREFQFNGLDVDWEY 641



 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 607 YEVKVHVDKPYEVKV 651
           Y+VK+  D PYE  +
Sbjct: 886 YKVKLEYDGPYETSI 900


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +3

Query: 582 LHR*KESTL*SQGPR*QALRSQSQSAPLPTP 674
           LHR KE  L   G   Q +     S P P P
Sbjct: 162 LHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +3

Query: 582 LHR*KESTL*SQGPR*QALRSQSQSAPLPTP 674
           LHR KE  L   G   Q +     S P P P
Sbjct: 162 LHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +3

Query: 582 LHR*KESTL*SQGPR*QALRSQSQSAPLPTP 674
           LHR KE  L   G   Q +     S P P P
Sbjct: 162 LHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 428 TGTFFTTSTVLMCSW 384
           TG FFT   VLM  W
Sbjct: 426 TGPFFTFCNVLMEMW 440


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = -1

Query: 705 FHXVRXFFSQTV*GVGHFDFDFVRLVNVDLDFIRYFLFNGV 583
           FH    F    + GV +++   V        FI YFL   V
Sbjct: 124 FHTYEAFVWTRIMGVAYYEQYAVEFFQFYAQFIVYFLIYAV 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,307
Number of Sequences: 336
Number of extensions: 2603
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)