Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_J18
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 87 9e-18
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 84 8e-17
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 80 2e-15
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 79 2e-15
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 49 3e-06
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 44 1e-04
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 44 1e-04
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 44 1e-04
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 42 4e-04
03_01_0034 + 318432-318825,318902-319851 41 0.001
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 39 0.003
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 39 0.003
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 39 0.003
02_05_0167 - 26415319-26415494,26415591-26415840,26415909-264159... 28 7.7
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 87.4 bits (207), Expect = 9e-18
Identities = 33/37 (89%), Positives = 37/37 (100%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP 37
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P DKT+GGGDD+FNTFFS
Sbjct: 37 PGDKTVGGGDDAFNTFFS 54
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTV+
Sbjct: 59 GKHVPRAVFVDLEPTVI 75
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 84.2 bits (199), Expect = 8e-17
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMP 37
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+D+T+GGGDD+FNTFFS
Sbjct: 37 PSDRTVGGGDDAFNTFFS 54
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTV+
Sbjct: 59 GKHVPRAVFVDLEPTVI 75
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 79.8 bits (188), Expect = 2e-15
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMP 37
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRA+ VD EPTV+
Sbjct: 59 GKHVPRAIFVDLEPTVI 75
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+D T+G D+FNTFFS
Sbjct: 37 PSDTTVGVAHDAFNTFFS 54
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 79.4 bits (187), Expect = 2e-15
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMP 37
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +3
Query: 180 PGARHPA*WP----DAPQTRPSGVETILSTLSSAXXXXGKHVPRAVSVDXEPTVV 332
P R+P W T P +T S GKHVPRA+ VD EPTV+
Sbjct: 82 PSLRYPNPWSYLTLACSDTTPGIARDAFNTFFSETSS-GKHVPRALFVDLEPTVI 135
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +1
Query: 88 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQD 228
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ D
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSD 221
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
RE I++ VGQ G QIG W+ CLEHGI DG
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDG 35
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 210
MRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 35
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQD 228
MRE + + GQ G QIG WE+ C EHGI P G+ D
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSD 41
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
MRE + + GQ G QIG WE+ C EHG+ P G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTG 34
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 210
MRE + + GQ G QIG WE+ C EHGI G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGR 35
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 210
MRE + + GQ G QIG WE+ C EHGI G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGK 35
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 210
MRE + + GQ G QIG WE+ C EHG+ G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGR 35
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 210
MRE + + GQ G QIG WE+ C EHGI G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGK 35
>02_05_0167 -
26415319-26415494,26415591-26415840,26415909-26415974,
26416457-26416600,26416813-26416868,26416966-26417101,
26417190-26417277,26417379-26417482,26418515-26419180,
26419337-26419432,26419974-26420242,26420334-26420489,
26421153-26421192
Length = 748
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 207 PDAPQTRPSGVETILSTLSS 266
PD P TRP G T LS+LSS
Sbjct: 317 PDQPYTRPIGGSTPLSSLSS 336
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,635,864
Number of Sequences: 37544
Number of extensions: 252800
Number of successful extensions: 714
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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