Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_J18
(666 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 89 3e-18
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 89 4e-18
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 7e-18
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 88 7e-18
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 87 2e-17
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 5e-17
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 41 8e-04
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 41 8e-04
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 38 0.006
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQDHRG 237
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP + G
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGG 44
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKT GGGDDSFNTFFS
Sbjct: 37 PSDKTQGGGDDSFNTFFS 54
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVVXXGP 344
GKHVPRAV VD EPTVV P
Sbjct: 59 GKHVPRAVFVDLEPTVVALSP 79
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 37
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTI GGDDSFNTFFS
Sbjct: 37 PSDKTIDGGDDSFNTFFS 54
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EP+VV
Sbjct: 59 GKHVPRAVFVDLEPSVV 75
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 88.6 bits (210), Expect = 4e-18
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMP 37
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMP 470
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 37 PSDKTIGGGDDSFNTFFS 54
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 470 PSDKTIGGGDDSFNTFFS 487
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTVV
Sbjct: 59 GKHVPRAVFVDLEPTVV 75
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTVV
Sbjct: 492 GKHVPRAVFVDLEPTVV 508
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 87.8 bits (208), Expect = 7e-18
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMP 37
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 37 PSDKTIGGGDDSFNTFFS 54
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV D EPTVV
Sbjct: 59 GKHVPRAVFCDLEPTVV 75
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 87.8 bits (208), Expect = 7e-18
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = +1
Query: 100 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 101
Score = 87.0 bits (206), Expect = 1e-17
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMP 622
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMP 549
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 101 PSDKTIGGGDDSFNTFFS 118
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 549 PSDKTIGGGDDSFNTFFS 566
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 622 PSDKTIGGGDDSFNTFFS 639
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTVV
Sbjct: 123 GKHVPRAVFVDLEPTVV 139
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTVV
Sbjct: 644 GKHVPRAVFVDLEPTVV 660
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTV 329
GKHVPRAV VD EPTV
Sbjct: 571 GKHVPRAVFVDLEPTV 586
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 87.4 bits (207), Expect = 9e-18
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMP 37
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 37 PSDKTIGGGDDSFNTFFS 54
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTVV
Sbjct: 59 GKHVPRAVFVDLEPTVV 75
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQ 225
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP Q
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQ 235
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMP 36
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 36 PSDKTIGGGDDSFNTFFS 53
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTVV
Sbjct: 58 GKHVPRAVFVDLEPTVV 74
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMP 408
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMP 841
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 841 PSDKTIGGGDDSFNTFFS 858
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDD+FNTFF+
Sbjct: 408 PSDKTIGGGDDAFNTFFA 425
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTV+
Sbjct: 430 GKHVPRAVFVDLEPTVI 446
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV D EPTVV
Sbjct: 863 GKHVPRAVFADLEPTVV 879
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 85.0 bits (201), Expect = 5e-17
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMP 455
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +1
Query: 151 IGNACWELYCLEHGIQPDGQMP 216
+GNACWELYCLEHGIQPDGQMP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMP 22
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 22 PSDKTIGGGDDSFNTFFS 39
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFFS
Sbjct: 455 PSDKTIGGGDDSFNTFFS 472
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV D EPTVV
Sbjct: 44 GKHVPRAVFCDLEPTVV 60
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EP+V+
Sbjct: 477 GKHVPRAVFVDLEPSVI 493
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DKTIGGGDDSFNTFF+
Sbjct: 2 PSDKTIGGGDDSFNTFFA 19
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRAV VD EPTV+
Sbjct: 24 GKHVPRAVFVDLEPTVI 40
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
MRE +S+ GQ G QIG WE+ EHGI P G
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTG 34
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +1
Query: 91 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
K KMRE + GQ G QIG WE+ EHGI P G
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTG 247
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
MRE + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTG 34
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
MRE + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTG 34
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GK+VPRAV VD EPTV+
Sbjct: 970 GKYVPRAVLVDLEPTVI 986
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 166 WELYCLEHGIQPDGQ 210
WE+ EHGI PDGQ
Sbjct: 2 WEVIAEEHGIDPDGQ 16
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,981,856
Number of Sequences: 59808
Number of extensions: 233328
Number of successful extensions: 550
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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