Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_J18
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 87 1e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 87 1e-17
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 84 7e-17
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 84 7e-17
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 84 7e-17
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 84 7e-17
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 84 7e-17
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 84 1e-16
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 84 1e-16
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 82 3e-16
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 79 4e-15
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 76 2e-14
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 74 8e-14
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 47 1e-05
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 46 3e-05
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 44 1e-04
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 44 1e-04
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 40 0.002
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 40 0.002
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 31 0.56
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 9.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 9.1
U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical p... 27 9.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 9.1
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQDHRG 237
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP Q + G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEG 44
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
G++VPR++ VD EPTVV
Sbjct: 57 GRYVPRSIFVDLEPTVV 73
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQDHRG 237
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP Q + G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEG 44
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
G++VPR++ VD EPTVV
Sbjct: 57 GRYVPRSIFVDLEPTVV 73
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 84.2 bits (199), Expect = 7e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQDHRG 237
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP + + G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG 44
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 207 PDAPQTRPSGVETILSTLSSAXXXXGKHVPRAVSVDXEPTVV 332
PD S E T + G++VPR++ VD EPTVV
Sbjct: 32 PDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVV 73
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 84.2 bits (199), Expect = 7e-17
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMP 37
Score = 35.5 bits (78), Expect = 0.034
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DK++GG DDSF+TFFS
Sbjct: 37 PSDKSLGGSDDSFSTFFS 54
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
G+HVPRAV VD EPTV+
Sbjct: 59 GRHVPRAVMVDLEPTVI 75
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 84.2 bits (199), Expect = 7e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQDHRG 237
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP + + G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG 44
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 207 PDAPQTRPSGVETILSTLSSAXXXXGKHVPRAVSVDXEPTVV 332
PD S E T + G++VPR++ VD EPTVV
Sbjct: 32 PDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVV 73
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 84.2 bits (199), Expect = 7e-17
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMP 37
Score = 35.5 bits (78), Expect = 0.034
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DK++GG DDSF+TFFS
Sbjct: 37 PSDKSLGGSDDSFSTFFS 54
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
G+HVPRAV VD EPTV+
Sbjct: 59 GRHVPRAVMVDLEPTVI 75
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 84.2 bits (199), Expect = 7e-17
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMP 37
Score = 35.5 bits (78), Expect = 0.034
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DK++GG DDSF+TFFS
Sbjct: 37 PSDKSLGGSDDSFSTFFS 54
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
G+HVPRAV VD EPTV+
Sbjct: 59 GRHVPRAVMVDLEPTVI 75
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQDHRG 237
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP Q G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG 44
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
G++VPR++ VD EPTVV
Sbjct: 57 GRYVPRSIFVDLEPTVV 73
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQDHRG 237
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP Q G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG 44
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
G++VPR++ VD EPTVV
Sbjct: 57 GRYVPRSIFVDLEPTVV 73
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 82.2 bits (194), Expect = 3e-16
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMP 36
Score = 35.5 bits (78), Expect = 0.034
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 215 PTDKTIGGGDDSFNTFFS 268
P+DK++GG DDSF+TFFS
Sbjct: 36 PSDKSLGGSDDSFSTFFS 53
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
G+HVPRAV VD EPTV+
Sbjct: 58 GRHVPRAVMVDLEPTVI 74
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 78.6 bits (185), Expect = 4e-15
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP 216
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMP 37
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 216 PQTRPSGVETILSTLSSAXXXXGKHVPRAVSVDXEPTVV 332
P GVE + GKHVPRA+ VD EPTV+
Sbjct: 37 PDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLEPTVI 75
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 103 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQDHRG 237
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG M + +D G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDG-MINEEDSLG 48
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRA+ VD EPT +
Sbjct: 64 GKHVPRAIMVDLEPTPI 80
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 207 PDAPQTRPSGVETILSTLSSAXXXXGKHVPRAVSVDXEPTVV 332
PD P G L T S G+HVPR++ VD EPTVV
Sbjct: 32 PDGTSMEPDGNSGSLGTFFS-DTGYGRHVPRSIFVDLEPTVV 72
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 74.1 bits (174), Expect = 8e-14
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG 40
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPR + VD EPTVV
Sbjct: 65 GKHVPRCLFVDLEPTVV 81
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 68.1 bits (159), Expect = 5e-12
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQDHR 234
REC+S+H+GQAG QIGNACWELYC+EHG+ G + + ++
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNK 47
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPRA+ VD EPTV+
Sbjct: 62 GKHVPRAIYVDLEPTVL 78
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQD 228
MRE + V GQ G QIG+ WE+ EHGIQPDG D
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESD 41
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQD 228
MRE + V GQ G QIG+ WE+ EHGIQPDG D
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETD 41
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/41 (51%), Positives = 23/41 (56%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQD 228
MRE + V GQ G QIG WE+ EHGIQPDG D
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESD 41
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 210
MRE + + GQ G QIG+ WE+ EHGI P GQ
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQ 35
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 210
MRE + + GQ G QIG+ WE+ EHGI P GQ
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQ 35
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
M+E I+V VGQ G QIG WE EHG+Q DG
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDG 34
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
M+E I+V VGQ G QIG WE EHG+Q DG
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDG 34
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 207
MRE + + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG 34
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 118 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQD 228
++VHVGQ G Q+ A W+ EHGI GQ H D
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDD 44
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 118 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPHRQD 228
++VHVGQ G Q+ A W+ EHGI GQ H D
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDD 44
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 282 GKHVPRAVSVDXEPTVV 332
GKHVPR + VD EPTVV
Sbjct: 37 GKHVPRCLFVDLEPTVV 53
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1
Query: 172 LYCLEHGIQPDG 207
++CLEHGIQPDG
Sbjct: 1 MFCLEHGIQPDG 12
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 527 LPPXXXXXHPXXGXPXXXXGGASPPXXXGXXXXXGGGXXXXPP 655
LPP P G P G PP G GG PP
Sbjct: 706 LPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 527 LPPXXXXXHPXXGXPXXXXGGASPPXXXGXXXXXGGGXXXXPP 655
LPP P G P G PP G GG PP
Sbjct: 706 LPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
>U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical
protein F25B5.2 protein.
Length = 757
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 128 TLAKPESRSVMPAGSFTAWSTASSLMARCPTDKTIGGG 241
T + PE++ MP F S +S + R PT K+ GGG
Sbjct: 194 TRSVPENQDDMPPALFR--SLCNSAVRRVPTSKSEGGG 229
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 527 LPPXXXXXHPXXGXPXXXXGGASPPXXXGXXXXXGGGXXXXPP 655
LPP P G P G PP G GG PP
Sbjct: 289 LPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,942,755
Number of Sequences: 27780
Number of extensions: 186066
Number of successful extensions: 468
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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