Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_J12
(855 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69978-1|CAA93818.1| 268|Anopheles gambiae serine protease prot... 42 3e-05
AY341209-1|AAR13773.1| 196|Anopheles gambiae SP14D1 protein. 39 2e-04
AY341208-1|AAR13772.1| 196|Anopheles gambiae SP14D1 protein. 39 2e-04
AY341207-1|AAR13771.1| 196|Anopheles gambiae SP14D1 protein. 39 2e-04
AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein. 39 2e-04
Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein. 38 3e-04
Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precurso... 38 3e-04
Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein. 38 3e-04
AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14... 38 4e-04
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 38 5e-04
Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related prot... 37 7e-04
Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein. 35 0.003
Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein. 35 0.004
Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein. 35 0.004
AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease pr... 35 0.004
Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein. 34 0.005
Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase pr... 33 0.011
AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease pr... 33 0.011
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 33 0.011
AJ278310-1|CAB93496.1| 219|Anopheles gambiae serine protease-li... 30 0.078
Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase pr... 29 0.18
Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase pr... 29 0.24
AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14... 27 0.55
Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like pr... 27 0.96
Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein. 27 0.96
AF117750-1|AAD38336.1| 380|Anopheles gambiae serine protease 18... 27 0.96
Z32645-1|CAA83567.1| 258|Anopheles gambiae chymotrypsinogen-lik... 26 1.3
Z18888-1|CAA79326.1| 258|Anopheles gambiae chymotrypsin 2 protein. 26 1.3
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 26 1.3
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 26 1.3
AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine... 25 2.9
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 24 6.8
AY745229-1|AAU93509.1| 56|Anopheles gambiae glutaredoxin protein. 23 9.0
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 9.0
AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease pr... 23 9.0
>Z69978-1|CAA93818.1| 268|Anopheles gambiae serine protease
protein.
Length = 268
Score = 41.5 bits (93), Expect = 3e-05
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 48 MPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTS-VCNGDSGGGMV 185
+P++D E C + Y F ++ CAG +GTS VC+GDSGG +V
Sbjct: 181 LPIMDLEVCRKIY---FTETVADSNICAGTMEGTSSVCSGDSGGPLV 224
>AY341209-1|AAR13773.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 39.1 bits (87), Expect = 2e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 9 ETGVATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMV 185
ET A+++ VE+ VVD + C +Y + S CAG G C+GDSGG ++
Sbjct: 95 ETASASQKKLKVELTVVDVKDCSPAYQRNGISLDSTQM-CAGGIRGKDTCSGDSGGPLM 152
>AY341208-1|AAR13772.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 39.1 bits (87), Expect = 2e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 9 ETGVATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMV 185
ET A+++ VE+ VVD + C +Y + S CAG G C+GDSGG ++
Sbjct: 95 ETASASQKKLKVELTVVDVKDCSPAYQRNGISLDSTQM-CAGGIRGKDTCSGDSGGPLM 152
>AY341207-1|AAR13771.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 39.1 bits (87), Expect = 2e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 9 ETGVATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMV 185
ET A+++ VE+ VVD + C +Y + S CAG G C+GDSGG ++
Sbjct: 95 ETASASQKKLKVELTVVDVKDCSPAYQRNGISLDSTQM-CAGGIRGKDTCSGDSGGPLM 152
>AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 39.1 bits (87), Expect = 2e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 9 ETGVATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMV 185
ET A+++ VE+ VVD + C +Y + S CAG G C+GDSGG ++
Sbjct: 95 ETASASQKKLKVELTVVDVKDCSPAYQRNGISLDSTQM-CAGGIRGKDTCSGDSGGPLM 152
>Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 38.3 bits (85), Expect = 3e-04
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 33 LSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDG-TSVCNGDSGGGMV 185
L +P V+ + C ++YS+F ++ CAGY+ G C GDSGG +V
Sbjct: 185 LRAANVPTVNQKECNKAYSDF--GGVTDRMLCAGYQQGGKDACQGDSGGPLV 234
>Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precursor
of ANTRYP7 protein.
Length = 267
Score = 38.3 bits (85), Expect = 3e-04
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 33 LSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDG-TSVCNGDSGGGMV 185
L +P VD E C +YS + ++ CAGY+ G C GDSGG +V
Sbjct: 179 LRAANVPTVDQEECREAYSHEAI---TDRMLCAGYQQGGKDACQGDSGGPLV 227
>Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 38.3 bits (85), Expect = 3e-04
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 33 LSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDG-TSVCNGDSGGGMV 185
L +P V+ + C ++YS+F ++ CAGY+ G C GDSGG +V
Sbjct: 185 LRAANVPTVNQKECNKAYSDF--GGVTDRMLCAGYQQGGKDACQGDSGGPLV 234
>AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14D
protein.
Length = 360
Score = 37.9 bits (84), Expect = 4e-04
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +3
Query: 9 ETGVATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMV 185
ET A+++ VE+ VVD + C Y + S CAG G C+GDSGG ++
Sbjct: 259 ETASASQKKLKVELTVVDVKDCSPVYQRNGISLDSTQM-CAGGVRGKDTCSGDSGGPLM 316
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 37.5 bits (83), Expect = 5e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 21 ATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMV 185
+T++L L +PVVD E C ++S + CAG G C GDSGG ++
Sbjct: 271 STKKLHL-RVPVVDNEVCADAFSSIRLEIIPTQL-CAGGEKGKDSCRGDSGGPLM 323
>Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related
protease protein.
Length = 273
Score = 37.1 bits (82), Expect = 7e-04
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 33 LSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRD-GTSVCNGDSGGGMV 185
L +P V+ + C ++Y + +E +CAGY+ GT C DSGG V
Sbjct: 184 LRATNVPTVNQQECNQAYQSY--GGITEQMFCAGYKQGGTGTCRNDSGGPFV 233
>Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 35.1 bits (77), Expect = 0.003
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 33 LSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGY-RDGTSVCNGDSGGGMVI 188
L +P V+ + C +YS ++ CAGY R G C GDSGG +V+
Sbjct: 186 LRAANIPTVNQKECTIAYSSS--GGITDRMLCAGYKRGGKDACQGDSGGPLVV 236
>Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 34.7 bits (76), Expect = 0.004
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 21 ATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDG-TSVCNGDSGGGMV 185
+++ L +P V E C +Y +F T CAGY+ G C GDSGG +V
Sbjct: 184 SSDFLRAANVPTVSHEDCSDAYM-WFGEITDRML-CAGYQQGGKDACQGDSGGPLV 237
>Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 34.7 bits (76), Expect = 0.004
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 21 ATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDG-TSVCNGDSGGGMV 185
+++ L +P V E C +Y +F T CAGY+ G C GDSGG +V
Sbjct: 184 SSDFLRAANVPTVSHEDCSDAYM-WFGEITDRML-CAGYQQGGKDACQGDSGGPLV 237
>AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease
protein.
Length = 355
Score = 34.7 bits (76), Expect = 0.004
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 9 ETGVATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMV 185
E+ A+E VE+ V D C + Y + + CAG G C GDSGG ++
Sbjct: 254 ESASASERKLKVELTVQDPSRCRQIYRGINIALKASQM-CAGGLQGKDTCTGDSGGPLM 311
>Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 34.3 bits (75), Expect = 0.005
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 33 LSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDG-TSVCNGDSGGGMV 185
L +P V+ + C ++Y + +E CAGY+ G C GDSGG +V
Sbjct: 186 LRAANVPTVNQDECNQAYHKS--EGITERMLCAGYQQGGKDACQGDSGGPLV 235
>Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase
protein.
Length = 250
Score = 33.1 bits (72), Expect = 0.011
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 15 GVATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDG-TSVCNGDSGGGM 182
G +L V +P++ E C + +++F ++ CAG +G C GDSGG M
Sbjct: 143 GTFPMKLQEVHVPILSNEQC-HNQTQYFRFQINDRMMCAGIPEGGKDSCQGDSGGPM 198
>AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease
protein.
Length = 364
Score = 33.1 bits (72), Expect = 0.011
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 42 VEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMV 185
VE+P ++ E C Y+ V S+ C G +G+ C GDSGG ++
Sbjct: 269 VELPGLEHEACNSVYAVANVTL-SDKQLCIGGLNGSDSCRGDSGGPLM 315
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.011
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 VEMPVVDTETCIRSYSEFFVRFTSEYTYCAG-YRDGTSVCNGDSGGGMVI*LVTR 203
V +P+ + C E +V T CAG Y G C GDSGG ++I L R
Sbjct: 346 VRIPIWSNQEC----QEVYVNRIYNTTLCAGEYDGGKDSCQGDSGGPLMIQLPNR 396
>AJ278310-1|CAB93496.1| 219|Anopheles gambiae serine protease-like
protein protein.
Length = 219
Score = 30.3 bits (65), Expect = 0.078
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 33 LSLVEMPVVDTETCIRSY--SEFFVRFTSEYTY-CAGYRDGTSVCNGDSGGGMV 185
L +E+P++ E C ++ + RF ++ CAG G C GD G ++
Sbjct: 108 LKKIELPIMPNEECQKALRTTRLGRRFKLHSSFICAGGEKGRDTCKGDGGSPLI 161
>Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase
protein.
Length = 237
Score = 29.1 bits (62), Expect = 0.18
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 48 MPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDG-TSVCNGDSGG 176
+P++ C +S + ++ CAGY +G C GDSGG
Sbjct: 140 VPIISNMQCRKS--SYRASRITDNMLCAGYTEGGRDACQGDSGG 181
>Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase
protein.
Length = 247
Score = 28.7 bits (61), Expect = 0.24
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 9 ETGVATEELSLVEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMVI 188
E G + V++P++ + C RS R TS CAG S C GDSGG +++
Sbjct: 142 EGGTLPALVQHVDVPILTLDQC-RSMKYRASRITSNML-CAGKGKQDS-CQGDSGGPLLV 198
>AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14A
protein.
Length = 365
Score = 27.5 bits (58), Expect = 0.55
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 45 EMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMVI 188
+ PV E C + + + E CAG G C+GDSGG +++
Sbjct: 279 QFPVFAQEECDKKWKN--IEVIGEQL-CAGGVFGIDSCSGDSGGPLMV 323
>Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like
protease ANCHYM1 protein.
Length = 259
Score = 26.6 bits (56), Expect = 0.96
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 126 CAGYRDGTSVCNGDSGGGMV 185
C + G CNGDSGG +V
Sbjct: 198 CTLTKTGEGACNGDSGGPLV 217
>Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein.
Length = 259
Score = 26.6 bits (56), Expect = 0.96
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 126 CAGYRDGTSVCNGDSGGGMV 185
C + G CNGDSGG +V
Sbjct: 198 CTLTKTGEGACNGDSGGPLV 217
>AF117750-1|AAD38336.1| 380|Anopheles gambiae serine protease 18D
protein.
Length = 380
Score = 26.6 bits (56), Expect = 0.96
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Frame = +3
Query: 15 GVATEELSLVEMPVVDTETCIRSY--SEFFVRFTSEYTYCAG-YRDGTSVCNGDSGGGMV 185
G ++EL V + + + E C Y + C G G C GDSGG +
Sbjct: 275 GAKSDELRKVALNIYNNELCAERYRYDRHLRQGILSTQMCVGDLAGGKDTCQGDSGGPLQ 334
Query: 186 I 188
+
Sbjct: 335 V 335
>Z32645-1|CAA83567.1| 258|Anopheles gambiae chymotrypsinogen-like
protease ANCHYM2 protein.
Length = 258
Score = 26.2 bits (55), Expect = 1.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 126 CAGYRDGTSVCNGDSGGGMV 185
C + G CNGDSGG +V
Sbjct: 198 CTLTKAGEGACNGDSGGPLV 217
>Z18888-1|CAA79326.1| 258|Anopheles gambiae chymotrypsin 2 protein.
Length = 258
Score = 26.2 bits (55), Expect = 1.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 126 CAGYRDGTSVCNGDSGGGMV 185
C + G CNGDSGG +V
Sbjct: 198 CTLTKAGEGACNGDSGGPLV 217
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 26.2 bits (55), Expect = 1.3
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 123 YCAGYRD-GTSVCNGDSGGGMV 185
+CAG + G C+GDSGG +V
Sbjct: 1249 FCAGTLEPGVDSCDGDSGGPLV 1270
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 26.2 bits (55), Expect = 1.3
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 123 YCAGYRD-GTSVCNGDSGGGMV 185
+CAG + G C+GDSGG +V
Sbjct: 1249 FCAGTLEPGVDSCDGDSGGPLV 1270
>AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine
protease protein.
Length = 405
Score = 25.0 bits (52), Expect = 2.9
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = +3
Query: 42 VEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGTSVCNGDSGGGMV 185
+ +P V+ E C +++ + CAG C GDSG ++
Sbjct: 312 LSLPYVEREKCSKTFRPWSFAL-GPGQMCAGGERAKDTCAGDSGSPLM 358
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
protein.
Length = 1344
Score = 23.8 bits (49), Expect = 6.8
Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = -3
Query: 565 PPGSVLEP-DHAGVLNGD 515
PPGS+L+P D A V+ G+
Sbjct: 1092 PPGSILDPSDGAAVVGGN 1109
>AY745229-1|AAU93509.1| 56|Anopheles gambiae glutaredoxin protein.
Length = 56
Score = 23.4 bits (48), Expect = 9.0
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
Frame = +3
Query: 540 SGSRTLP----GGEFDWGGTSVKE 599
+G+RT+P GG F GGT +K+
Sbjct: 21 TGARTVPRVFIGGNFVGGGTDIKK 44
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 23.4 bits (48), Expect = 9.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 586 VPPQSNSPPGSVLEPD 539
+PP SNS P S PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883
>AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease
protein.
Length = 375
Score = 23.4 bits (48), Expect = 9.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 126 CAGYRDGTSVCNGDSGGGMV 185
CAG C+GDSGG ++
Sbjct: 307 CAGGIRDEDTCHGDSGGPLM 326
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 877,305
Number of Sequences: 2352
Number of extensions: 19678
Number of successful extensions: 72
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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