Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J11
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...    93   2e-19
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    32   0.45 
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    32   0.45 
U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical ...    29   4.2  
AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z81528-8|CAB04288.2|  643|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
 Frame = +3

Query: 111 PHIMLTLXKKANDVFSKGYHFGVFKLDLKTKSESG--VEFTSGITSNQESGKVFGSLSSK 284
           P     L K A D+F+KGY+FG  K+D  T++     VEF S  + N  SGK+ G+L  K
Sbjct: 3   PPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLDVK 62

Query: 285 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLXRHFCP 416
           + +  YG+T TEKWNT+N L T I + ++   GLKVTL   + P
Sbjct: 63  YKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAP 106



 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 30/101 (29%), Positives = 49/101 (48%)
 Frame = +2

Query: 545 GWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVS 724
           GWL G    FD+   K +  + A G+ +  + LH+ V N  DFG S+Y KV+  ++ G  
Sbjct: 148 GWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFGASLYHKVASNVEVGTQ 207

Query: 725 MKWTAGSADTLFGVGAKYALDQXASLHAKXXNKSXSXLVTT 847
           + W  G     + +  KYA  +  ++ AK  + S   +  T
Sbjct: 208 LGWKVGGNGADYALATKYAPSRDLTVRAKVNSSSQVAVAAT 248



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +1

Query: 388 KSPLXGTFAPQTGTKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQG 546
           K  L   +AP  G ++GK+K  +   T  V  ++ +  A PV++ A V +  G
Sbjct: 97  KVTLDSLYAPHAGKRSGKVKLDWALPTARVTADVGVTSA-PVINAAGVFSRDG 148


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
            T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 198  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 353
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
            protein T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 198  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 353
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 557 GVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWT 736
           G   QF+T++    K     GY+    +L  N    +DFG +      +++DC VS KWT
Sbjct: 657 GNRNQFETEEE--CKQICLPGYEKSK-SLIPNNQLLEDFGNTEVDDGGERVDCEVS-KWT 712

Query: 737 A-GSADTLFGVGAK 775
           A GS     G G K
Sbjct: 713 AWGSCSVSCGRGKK 726


>AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1b protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 216 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 356
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1a protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 216 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 356
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>Z81528-8|CAB04288.2|  643|Caenorhabditis elegans Hypothetical
           protein F35E2.9 protein.
          Length = 643

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 575 DTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWTAGSADT 754
           D    K S + F   + S    +H N+       GS+++  + KL  G S K      +T
Sbjct: 455 DENSIKRSDSGFDAYFFSHSIWMHKNITVNMSTSGSLFKDPNSKL-YGTSTK-IVNDKET 512

Query: 755 LFGVG 769
           +FG+G
Sbjct: 513 VFGIG 517


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 261 VFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 356
           VFG LSS     DYG+T   K+ TD      I
Sbjct: 252 VFGELSSSKKTIDYGITKQWKYRTDGRFELSI 283


>Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical
           protein F47B10.1 protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -1

Query: 287 KFGGKAAKNLSAFLVGGDSAGEFNTRLALGLQVEFENTKVIALAEDIIG--LLXQGQHNM 114
           + GGK     +  L GG   G F++ L  G+Q+ F   +V   A  +IG  L+ +   + 
Sbjct: 60  RIGGKDYVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHR 119

Query: 113 GEPC 102
           G+ C
Sbjct: 120 GKKC 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,532,803
Number of Sequences: 27780
Number of extensions: 412871
Number of successful extensions: 997
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)