Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_J09
(900 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58733| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_58124| Best HMM Match : Ribonuclease_3 (HMM E-Value=7e-28) 100 1e-21
SB_31593| Best HMM Match : Ribonuclease_3 (HMM E-Value=6.30024e-42) 50 8e-08
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05) 33 0.42
SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 31 0.96
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 31 1.3
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 30 2.2
SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15) 30 2.9
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 29 3.9
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 29 3.9
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 29 3.9
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 3.9
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_39040| Best HMM Match : ChaB (HMM E-Value=4.2) 29 5.1
SB_55065| Best HMM Match : ChaB (HMM E-Value=4.2) 29 5.1
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_57869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_21535| Best HMM Match : Band_41 (HMM E-Value=3.7e-24) 28 8.9
SB_58709| Best HMM Match : CRA_rpt (HMM E-Value=1.3) 28 8.9
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 28 8.9
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 8.9
>SB_58733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2060
Score = 116 bits (279), Expect = 3e-26
Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
Frame = +2
Query: 92 LERVLQYRFRDRSLLLQAMTHASHHR--NVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 265
+E L Y FRDR +LLQA+TH S+ R + + Y++LEFLGDA+LDYL+TRH+ +
Sbjct: 1827 VEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPR 1886
Query: 266 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISEE 445
SPGA+TDLRSA+VNN A L + FHK+ R MS L ++++ +V+ +SE
Sbjct: 1887 LSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKIVRSFVR-------RLSE- 1938
Query: 446 HYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSG 556
+E E D + LGDLFE++ GA+++D G
Sbjct: 1939 -----IEEKETRPD----QVLGDLFEALLGALYVDCG 1966
Score = 37.1 bits (82), Expect = 0.019
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 128 SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 307
+L+L+A+T S N + D ++RLE GDA + Y I+ LY D + G L+ LR V
Sbjct: 1471 TLILRALTTTS--ANDIID-HERLEIYGDAFIKYAISELLYSDFPNVNEGRLSFLRGLRV 1527
Query: 308 NN 313
+N
Sbjct: 1528 SN 1529
>SB_58124| Best HMM Match : Ribonuclease_3 (HMM E-Value=7e-28)
Length = 602
Score = 100 bits (240), Expect = 1e-21
Identities = 73/185 (39%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Frame = +2
Query: 20 RSPLLRYVEDPEGELEKMVSGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRL 199
R + Y +P+ L++ + E+ + Y F ++ L+QA+THAS+ +N T+
Sbjct: 432 RPTITEYNPNPQ-VLKRFAVQLQGFEKRIGYEFSNKLYLIQALTHASYSQNRNTN----- 485
Query: 200 EFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSP- 376
LD PG LTDLR ALVNN IFA +A +HGF+K MSP
Sbjct: 486 -------LD---------------PGELTDLRQALVNNNIFAEIAVKHGFNKSLFQMSPE 523
Query: 377 GLNE--VLKKYVKIQEENGHSISEEHYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLD 550
N+ V +VK +E G IS++ +L ++ E E +E PK LGD+FESVAGAIFLD
Sbjct: 524 WFNKIGVFVDHVKEREARGIQISKDPFLTLSNDDE--EGIEAPKVLGDIFESVAGAIFLD 581
Query: 551 SGMSL 565
SGM L
Sbjct: 582 SGMDL 586
Score = 36.3 bits (80), Expect = 0.034
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 122 DRSLLLQAMTHASHHRNVLTDCY--QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLR 295
D LLLQA+T S D + +RLE LGDA L ++ LY + G LT +
Sbjct: 314 DSELLLQALTTKS-----AGDAFDLERLEMLGDAFLKQAVSIFLYCCYKDGDEGKLTKRK 368
Query: 296 SALVNNTIFATLAARHGFHKYFRH 367
++ ++N +A R G +Y ++
Sbjct: 369 TSQLSNRALYRVACRLGLPEYLQN 392
>SB_31593| Best HMM Match : Ribonuclease_3 (HMM E-Value=6.30024e-42)
Length = 618
Score = 49.6 bits (113), Expect(2) = 8e-08
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +2
Query: 191 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHM 370
QRLEFLGD++L ++++ LY+ H G LT LRS+LVN+ A +A + ++
Sbjct: 478 QRLEFLGDSVLQFVVSVFLYQHFPDHHEGHLTLLRSSLVNSRSQAEIARQLNLQEFINTG 537
Query: 371 SPGLNEVLKK 400
G+ V +K
Sbjct: 538 PTGVKNVREK 547
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 92 LERVLQYRFRDRSLLLQAMTHASHHRN 172
L+ L Y F+DR LL A++H S+H N
Sbjct: 48 LDAKLGYTFKDRMLLQLALSHPSYHLN 74
Score = 25.0 bits (52), Expect(2) = 8e-08
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 500 KALGDLFESVAGAIFLDSGMSLGRRVEV 583
K L D+ E++ A+F+D G+ R VEV
Sbjct: 547 KMLADVLEALIAAVFVDKGL---RHVEV 571
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.5 bits (73), Expect = 0.24
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +2
Query: 632 PXPXPLFXXPXLGPSPXTXQVSANPXPAXPAXXGAFRXXCXWXLXPPPXXLSPGXXXXPX 811
P P P + P P P P P P P P L P P
Sbjct: 110 PPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPP 169
Query: 812 PRIPHGXPXXPPAPXEXXP 868
P P+ P PP P P
Sbjct: 170 PNAPYPPPPYPPPPNPPYP 188
Score = 31.9 bits (69), Expect = 0.73
Identities = 21/79 (26%), Positives = 24/79 (30%)
Frame = +2
Query: 632 PXPXPLFXXPXLGPSPXTXQVSANPXPAXPAXXGAFRXXCXWXLXPPPXXLSPGXXXXPX 811
P P P + P P P + P P P + PPP P P
Sbjct: 126 PPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLY--------PPPPNPPPPNAPYPPP 177
Query: 812 PRIPHGXPXXPPAPXEXXP 868
P P P PP P P
Sbjct: 178 PYPPPPNPPYPPPPNPPYP 196
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/79 (26%), Positives = 26/79 (32%)
Frame = +2
Query: 632 PXPXPLFXXPXLGPSPXTXQVSANPXPAXPAXXGAFRXXCXWXLXPPPXXLSPGXXXXPX 811
P P PL+ P P+P P P P + PPP +P P
Sbjct: 155 PYPPPLYPPP---PNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNP-----PP 206
Query: 812 PRIPHGXPXXPPAPXEXXP 868
P P+ P P P P
Sbjct: 207 PNPPYPPPPNAPNPPYPPP 225
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 767 PPPXXLSPGXXXXPXPRIPHGXPXXPPAP 853
PPP P P P P+ P PP P
Sbjct: 105 PPPYPPPPNPPYPPPPNAPYPPPPNPPYP 133
>SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05)
Length = 770
Score = 32.7 bits (71), Expect = 0.42
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +2
Query: 278 ALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISEEHYLI 457
++ + SA+ +N + L+ ++ +F P L KYVK + + EEH L+
Sbjct: 214 SMLPVSSAITSNRTISQLSLQNPLDSFFP-FDPYLLRRSSKYVKPHYQEWKGVGEEHALL 272
Query: 458 HEDEMEQAEDVEVPKALGD 514
+ + +++E E +G+
Sbjct: 273 EDHQDDESEGEEKRALIGE 291
>SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 761 LXPPPXXLSPGXXXXPXPRIPHGXPXXPPAPXEXXPXXXG 880
L PPP L P P P G P PP P P G
Sbjct: 215 LMPPPGMLPPPGGMPPGRMPPQGLPFPPPGPIPPPPGAGG 254
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 612 SSRPNQAARTTSTRRPSDMPESRNMAPATDSKRS 511
S+RP Q +R T T++P D +R P S++S
Sbjct: 912 STRPGQKSRKTRTKKPQDKQAARQSRPRQASRKS 945
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 755 WXLXPPPXXLSPGXXXXPXPRIPHGXPXXPP 847
W PPP PG P P I G P PP
Sbjct: 191 WTSVPPPPPPGPGGIPPPPPPIRGGVPPPPP 221
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 30.3 bits (65), Expect = 2.2
Identities = 26/88 (29%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Frame = +2
Query: 626 RGPXPXPLFXXPXLG--PSPXTXQVSANPXPAXPAXXGAFRXXCXWXLXPPPXX-LSP-- 790
RG P P P G P P ++ P P P+ PPP ++P
Sbjct: 302 RGAPPPP----PSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPP 357
Query: 791 --GXXXXPXPRIPHGXPXXPPAPXEXXP 868
G P P P G P PP P E P
Sbjct: 358 VGGAAPPPPPPPPVGGPPPPPPPIEGRP 385
>SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15)
Length = 1277
Score = 29.9 bits (64), Expect = 2.9
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Frame = +2
Query: 143 AMTHASHHRNVLTDCYQRLEFLGDAILDYL-----ITRHLYEDKRCHSPGALTDLRSALV 307
A H + VL L+F D ILD I + E H A ++ L+
Sbjct: 1093 AARHCTTDHFVLFIALALLQFYRDIILDNKMDFTDIIKFFNEMAERHDAKAALEMARTLI 1152
Query: 308 NNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISEEHYLIHEDEMEQAED 487
F T G H YF +P +E+ + KI+ GH + +++D ++ +
Sbjct: 1153 TKQAF-TRCFSAGRHTYFSAKTPFNSEITGQEAKIKYNPGH---DPVMRLYDDNGKEVKT 1208
Query: 488 VEV 496
V+V
Sbjct: 1209 VDV 1211
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 767 PPPXXLSPGXXXXPXPRIPHGXPXXPPAPXEXXP 868
PP PG P P++P G P P AP P
Sbjct: 275 PPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGP 308
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 407 KIQEENGHSISEEHYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSL 565
K+++ G SEE +L+ + +E EV + LGD+ + V I LD SL
Sbjct: 382 KMEKGRGSDSSEEMFLLANESIEGKSTEEVKEILGDIIKRVE-KITLDHFTSL 433
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -1
Query: 669 PRXGXXKRGXGXGPRXXASSSRPNQAARTTSTRRPSDMPESRNMAPATDSKRS 511
PR K P +RP QA+R T T +P D + + P+ +K S
Sbjct: 640 PRQASRKTKTSKQPDQDKQDARPRQASRKTKTSKPQDQ-DKQAARPSCKTKTS 691
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -1
Query: 669 PRXGXXKRGXGXGPRXXASSSRPNQAARTTSTRRPSDMPESRNMAPATDSKRSPSA 502
PR K ++RP QA+R T T +P D +R + +K S ++
Sbjct: 544 PRQASRKTKTSKPQDQEKQATRPRQASRKTKTSKPQDKQAARPKQASRKTKTSKTS 599
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 767 PPPXXLSPGXXXXPXPRIPHGXPXXPPAPXEXXPXXXGXGXSP 895
PPP P P P G P PP P P G P
Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPP 334
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/96 (23%), Positives = 38/96 (39%)
Frame = +2
Query: 245 LYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEEN 424
+Y SP + +R +NN F L ++ YF H E L K +
Sbjct: 753 IYPPPEVRSPEFESRIRQNEINNPKFNFLNQGDPYYAYFLHKVKDFKENLGKVPEPSSAP 812
Query: 425 GHSISEEHYLIHEDEMEQAEDVEVPKALGDLFESVA 532
G IS+ L+ + + D+ +PK +E +A
Sbjct: 813 GPGISKPKPLMQQQVL--ISDLNIPKEPPPEYEFMA 846
>SB_39040| Best HMM Match : ChaB (HMM E-Value=4.2)
Length = 401
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 274 GSPHRPPLGAGQQHHLRDPGGQTRLSQIF 360
G P RPP +G H R GG RL +F
Sbjct: 75 GDPVRPPRHSGALGHRRSDGGCPRLKSLF 103
>SB_55065| Best HMM Match : ChaB (HMM E-Value=4.2)
Length = 221
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 274 GSPHRPPLGAGQQHHLRDPGGQTRLSQIF 360
G P RPP +G H R GG RL +F
Sbjct: 75 GDPVRPPRHSGALGHRRSDGGCPRLKSLF 103
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +2
Query: 770 PPXXLSPGXXXXPXPRIPHGXPXXPPAPXE 859
PP +PG P P P P PP P +
Sbjct: 415 PPWQTTPGYIPPPPPGFPQFQPPPPPPPSD 444
>SB_57869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 464 DEMEQAEDVEVPK--ALGDLFESVAGAIFLDSGMS 562
D +++ + VEV K + D F ++ GAI+LD G S
Sbjct: 192 DSLKKEKHVEVTKEDVISDAFLALIGAIYLDQGSS 226
>SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 41 VEDPEGELEKMVSGYEQLERVLQYRFRDRSLLLQAMTHASHHR 169
+ED + ELEK + E R Q R + + + M H++
Sbjct: 810 LEDKQSELEKKIKSQENEMRENQMRLEQQKMFMNVMLQQHHYQ 852
>SB_21535| Best HMM Match : Band_41 (HMM E-Value=3.7e-24)
Length = 2278
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 271 AGSPHRPPLGAGQQHHLRDPGGQTRLSQIFQTHVSRLERGAEEIR 405
A S HRPP+G+ + H P Q +S + Q + ++ EE++
Sbjct: 460 AHSAHRPPMGSQAKLHNLTPAQQAYMSSLSQ-GIDSVDTADEELK 503
>SB_58709| Best HMM Match : CRA_rpt (HMM E-Value=1.3)
Length = 112
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 362 RHMSPGLNEVLKKYVKIQEENGHSISEEHYLIHEDEMEQAEDVEV 496
+ M G +VL Y +Q E+ +SE+ ++ ED+ +ED +V
Sbjct: 34 KKMVSGDKKVLSDYKTVQSEDRKLLSEDKKMVLEDKKMVSEDKKV 78
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 41 VEDPEGELEKMVSGYEQLERVLQYRFRDRSLLLQAMTHASHHR 169
+ED + ELEK + E R Q R + + + M H++
Sbjct: 38 LEDKQSELEKKIKSQENEMRENQMRLEQQKMFMNVMLQQHHYQ 80
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 344 GFHKYFRHMSPGLNEVLKKYVKIQEENGHSI 436
GFHKYF S E +K +K Q E G I
Sbjct: 233 GFHKYFLKASHEEREHAEKLMKFQNERGGRI 263
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 767 PPPXXLSPGXXXXPXPRIPHGXPXXPPAPXEXXP 868
PPP SP P P P P PP P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPP 404
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,124,094
Number of Sequences: 59808
Number of extensions: 392066
Number of successful extensions: 1947
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1797
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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