Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J08
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    27   0.18 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    27   0.18 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    25   0.96 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   6.8  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   6.8  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.9  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 281  PVLYGKGHHI-RNQPSCWNHMLVRSIPSILDHKK 379
            P++ G+ H++ RN+ + WN ++ + +  I D KK
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLHPIEDDKK 1212


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 281  PVLYGKGHHI-RNQPSCWNHMLVRSIPSILDHKK 379
            P++ G+ H++ RN+ + WN ++ + +  I D KK
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLHPIEDDKK 1212


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 8/27 (29%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -3

Query: 551 LGKAIAVKFG--MSTYLIVKFQHGTLH 477
           + +++   FG  ++T+L++ FQ+G +H
Sbjct: 363 ISRSLLTSFGGALTTFLVILFQYGGIH 389


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 211 LSGQLMSPPSEMTKPSNSN 267
           +  Q+++P  ++T PSN+N
Sbjct: 412 MQSQIINPQPQITSPSNTN 430


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 236 GGDINWPLRSCDSTPLNYFLYGNVLRLGYVK 144
           G D   P+ S +++ L   L  NV + GY K
Sbjct: 150 GNDAPPPITSFETSGLRPHLLENVKKSGYTK 180


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +1

Query: 187 LSGVESHDLSGQLMSPPSEMTKPSNSNKFYVSRAVW 294
           LSG   H   G L  P + M   S+    Y    VW
Sbjct: 132 LSGGPKHPDPGSLQVPGAPMMMSSHGPLMYGQPRVW 167


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 643 NSSETIKQFLIPNL 602
           N  +T++QFL PN+
Sbjct: 650 NGVDTLQQFLTPNM 663


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 337 HACEIHTIY 363
           H CE+HTI+
Sbjct: 115 HICELHTIF 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,099
Number of Sequences: 336
Number of extensions: 3977
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)