Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J08
         (823 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    31   0.84 
04_04_1540 - 34245246-34245797,34246904-34247157,34247989-34248577     28   7.8  

>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -2

Query: 165 FTSGLRESSSLYSTTKHPESQHSSCSS*NLASFMRRYHTKLHYLQRTR--GKP 13
           F+  + E+SSL   +    S  SSCSS +     R    +L Y+ + R  GKP
Sbjct: 77  FSKSMTENSSLSMESSRASSSSSSCSSFSSTDINRPIQQELSYINKERFAGKP 129


>04_04_1540 - 34245246-34245797,34246904-34247157,34247989-34248577
          Length = 464

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 304 VPLAIQHGKHKIYWNSKASSSRMVATS 224
           +P A+ HG   +YW+  A+ SR+ A+S
Sbjct: 53  LPRALNHGLLDLYWSLPAADSRIPASS 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,323,294
Number of Sequences: 37544
Number of extensions: 412552
Number of successful extensions: 926
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)