Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_J06
(864 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75620.1 68414.m08786 glyoxal oxidase-related contains simila... 32 0.57
At1g19900.1 68414.m02495 glyoxal oxidase-related contains simila... 32 0.57
At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-proly... 30 2.3
At3g09000.1 68416.m01053 proline-rich family protein 30 2.3
At2g37810.1 68415.m04642 CHP-rich zinc finger protein, putative 29 4.0
At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containi... 28 7.0
At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive eff... 28 7.0
At5g65090.1 68418.m08187 endonuclease/exonuclease/phosphatase fa... 28 9.2
At5g62070.1 68418.m07790 calmodulin-binding family protein conta... 28 9.2
At5g19090.2 68418.m02270 heavy-metal-associated domain-containin... 28 9.2
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 28 9.2
At3g54320.1 68416.m06003 ovule development protein, putative sim... 28 9.2
At3g05980.1 68416.m00683 expressed protein 28 9.2
At2g36680.2 68415.m04500 expressed protein 28 9.2
At2g36680.1 68415.m04499 expressed protein 28 9.2
At1g75680.1 68414.m08792 glycosyl hydrolase family 9 protein sim... 28 9.2
>At1g75620.1 68414.m08786 glyoxal oxidase-related contains
similarity to glyoxal oxidase precursor [Phanerochaete
chrysosporium] gi|1050302|gb|AAA87594
Length = 547
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 536 RPETLPMNQGC--GWRNPDGVAFRTTGDVDGETK 631
RP T+ N C G PDG +T GD+DGE K
Sbjct: 107 RPLTVQSNTWCSSGGVTPDGTLLQTGGDLDGERK 140
>At1g19900.1 68414.m02495 glyoxal oxidase-related contains
similarity to glyoxal oxidase precursor [Phanerochaete
chrysosporium] gi|1050302|gb|AAA87594
Length = 548
Score = 31.9 bits (69), Expect = 0.57
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 530 TPRPETLPMNQGC--GWRNPDGVAFRTTGDVDGETK 631
T RP T+ N C G PDGV +T GD DGE K
Sbjct: 101 TIRPLTVQSNTWCSSGSVRPDGVLVQTGGDRDGELK 136
>At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein similar to 70 kDa
peptidylprolyl isomerase (Peptidylprolyl cis-trans
isomerase) (PPiase) (Rotamase) (SP:Q43207) [Triticum
aestivum]; FKBP-type peptidyl-prolyl cis-trans
isomerase,Synechocystis sp., PIR2:S75144; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 229
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 324 SLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEQTSSI 446
SLR R+ P++ S+ST+ A R LS+ TSS+
Sbjct: 26 SLRIFASRSSAPSSSSSSSSTVAAASRRSISLSIIAVTSSV 66
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +3
Query: 288 SLIGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEQTSSI*ESAVAR 467
S+ GL RP S R+ + RP T + S + T RP+T + ++S+ A
Sbjct: 140 SVAGLRRPSSSGSSRSTS---RPATPTRRSTTPTTSTSRPVTTRASNSRSSTPTSRATLT 196
Query: 468 VHR--TSTSAVWLPTRD----RQQIPSRPGRRP 548
R TST+A T R P+R RP
Sbjct: 197 AARATTSTAAPRTTTTSSGSARSATPTRSNPRP 229
>At2g37810.1 68415.m04642 CHP-rich zinc finger protein, putative
Length = 233
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +2
Query: 395 CNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCL---APDQRPPTDPITPRPETLPMNQG 565
C A+N ++ G ++ R GPC + V C+ AP P + + P N
Sbjct: 131 CGASNTCMVCRGA-ILSWRYKCGPCMLDVHVECVNSSAPAATEPQMDLNTSQDPQPYNDE 189
Query: 566 CG 571
CG
Sbjct: 190 CG 191
>At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 576
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 535 GRDGICWRSLVGSQTADVDVR*TRATADSYID 440
G DG+ WR+L+G+ +A D++ + A I+
Sbjct: 488 GYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
>At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive
effector-related similar to Endonuclease sen1
(Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar
to tRNA-splicing endonuclease positive effector
(Swiss-Prot:Q00416) [Saccharomyces cerevisiae]
Length = 1090
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 563 GCGWRNPDGVAFRTTGDVDGETKFGESPGMVA--ILKVEPVDDNEPEGQKLNVYVG 724
GC W +G + + + E G VA + + PVD +P G L+ YVG
Sbjct: 321 GCKWAFKEGDVAVLSTPLPESDEDHEDAGRVAGTVRRHIPVDTRDPRGATLHFYVG 376
>At5g65090.1 68418.m08187 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 529
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -2
Query: 227 LMIDSRSPVSMFCAHADA--RKPMNRSLYIFGYYSQNITLTISNSQCSS*SNR 75
L+++ P + + A KP S+Y YS + T T S+S C S +R
Sbjct: 122 LVVEDNEPAAKWLALISQALNKPKQESVYSNAAYSASRTTTCSSSSCGSEESR 174
>At5g62070.1 68418.m07790 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 403
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/91 (20%), Positives = 30/91 (32%)
Frame = +2
Query: 194 TWTPGIWSRSLIRSSHQRSPRTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEG 373
TW P + L + SPR + Q + P + +P G + +
Sbjct: 247 TWKPHYHPKPLRSERNNESPRKRQQSLLGPRSTENSPQVGSSGSRRRTPFTPTSRSEYSW 306
Query: 374 ECVNYYLCNAANNTIITDGTNVIDIRVGSGP 466
C NYY N + + +R S P
Sbjct: 307 GCNNYYYSGYHPNYMANTESYKAKVRSQSAP 337
>At5g19090.2 68418.m02270 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 465
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 662 LKVEPVDDNEPEGQKLNVYVGGGSLIHPN 748
L+ + DD+ P K+ +GGG++I PN
Sbjct: 242 LEDDEFDDHPPPPNKMKPMMGGGNMIMPN 270
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 662 LKVEPVDDNEPEGQKLNVYVGGGSLIHPN 748
L+ + DD+ P K+ +GGG++I PN
Sbjct: 242 LEDDEFDDHPPPPNKMKPMMGGGNMIMPN 270
>At3g54320.1 68416.m06003 ovule development protein, putative
similar to ovule development protein aintegumenta
(GI:1209099) [Arabidopsis thaliana]
Length = 427
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 369 KGSASTITCAMRPITPLSLTEQTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRP 536
K +T TC+ P + +S + TSS +S R R + P+ D+ P+ P
Sbjct: 2 KKRLTTSTCSSSPSSSVSSSTTTSSPIQSEAPRPKRAKRAKKSSPSGDKSHNPTSP 57
>At3g05980.1 68416.m00683 expressed protein
Length = 245
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 209 IWSRSLIRSSHQRSPRTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGE 376
+W + L+R QR+P + PVT +V+ +PS+ S+ +D + + +EG+
Sbjct: 142 LW-KELLRLKKQRNPSSS--PVTARTVSSLSPSSSTSSSSSLEDAAKREEKEKEGK 194
>At2g36680.2 68415.m04500 expressed protein
Length = 168
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 578 NPDGVAFRTTGDVDGETKFGESPGMVAILKVEPVDD 685
+P +T+G + GE+ G++AILK + VD+
Sbjct: 34 SPSSSRPQTSGQIPSHVSPGEAAGIIAILKDKSVDE 69
>At2g36680.1 68415.m04499 expressed protein
Length = 218
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 578 NPDGVAFRTTGDVDGETKFGESPGMVAILKVEPVDD 685
+P +T+G + GE+ G++AILK + VD+
Sbjct: 34 SPSSSRPQTSGQIPSHVSPGEAAGIIAILKDKSVDE 69
>At1g75680.1 68414.m08792 glycosyl hydrolase family 9 protein
similar to endo-beta-1,4-glucanase GB:AAC12685
GI:3025470 from [Pinus radiata]
Length = 525
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = -3
Query: 703 LSFGLVVIDWFNLEDGDHSRGLSELGLAVHVARGPEGNAVRVPPAAALVHWQGLRPGRDG 524
++F V+ W LE GD +++L A R ++ P+ +++ Q P D
Sbjct: 117 MAFTATVLSWSILEYGDQMNAVNQLDPAKDSLRWITDYLIKAHPSDNVLYIQVGDPKVDH 176
Query: 523 ICW 515
CW
Sbjct: 177 PCW 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,992,851
Number of Sequences: 28952
Number of extensions: 342637
Number of successful extensions: 1131
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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