Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J05
         (842 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   0.99 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.99 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.99 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.99 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    25   0.99 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.2  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 423 IKYNHNSVQNYNSN*L*SNFDY 358
           ++Y +++ QNYNSN L + + Y
Sbjct: 60  LQYGYHNHQNYNSNVLSNGYGY 81


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 423 IKYNHNSVQNYNSN*L*SNFDY 358
           ++Y +++ QNYNSN L + + Y
Sbjct: 60  LQYGYHNHQNYNSNVLSNGYGY 81


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 498 FVLDVCCQIE-NRIWFVFVNIFYSVSIK 418
           F++ + C I+ N I F F   +YS+SI+
Sbjct: 536 FIIIIGCLIQFNTIVFAFCYCYYSISIR 563


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 423 IKYNHNSVQNYNSN*L*SNFDY 358
           ++Y +++ QNYNSN L + + Y
Sbjct: 60  LQYGYHNHQNYNSNVLSNGYGY 81


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 423 IKYNHNSVQNYNSN*L*SNFDY 358
           ++Y +++ QNYNSN L + + Y
Sbjct: 60  LQYGYHNHQNYNSNVLSNGYGY 81


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 551 YIPCI*RTHACILFTVKLLFL 489
           Y P + + +AC+L  VK+L++
Sbjct: 39  YYPSLAKCYACLLMVVKILWV 59


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 510 YCQTFVLDVCCQIENRIWFVFVNIFYSVSI 421
           + Q F  D   ++ + + F+FVN+F+ V I
Sbjct: 81  FFQQFECDNEPKLRHYLIFIFVNVFFWVII 110


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 527 HACILFTVKLLFLTSV 480
           +A I+FTV LLFL  +
Sbjct: 118 YAFIIFTVHLLFLLCI 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,490
Number of Sequences: 336
Number of extensions: 3365
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)