Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J05
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical p...    30   2.4  
U97552-8|AAB52863.2|  131|Caenorhabditis elegans Hypothetical pr...    29   4.1  

>Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 364 EIRL*LIGIVILYTIMIVFYTHTIKNINKDK 456
           E+   LIGI  +YT ++VFY H  K +   K
Sbjct: 119 EVNELLIGIFSIYTFIVVFYPHAEKYLKSKK 149


>Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 364 EIRL*LIGIVILYTIMIVFYTHTIKNINKDK 456
           E+   LIGI  +YT ++VFY H  K +   K
Sbjct: 119 EVNELLIGIFSIYTFIVVFYPHAEKYLKSKK 149


>U97552-8|AAB52863.2|  131|Caenorhabditis elegans Hypothetical
           protein W05H7.1 protein.
          Length = 131

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -3

Query: 711 RRGRRVLVESRATRQRVFRCVFLVAERRSALC*YFFKVMHKRYIKSI 571
           ++ R++LVE    R+RV +  F   ERR A     F  + K+Y++SI
Sbjct: 89  QKRRKMLVEREVKRRRVAKMFFACRERRQA-----FPDLAKQYLQSI 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,360,688
Number of Sequences: 27780
Number of extensions: 304236
Number of successful extensions: 676
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)