Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J04
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.76 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.3  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 423 FKAEFFDPDKWADLF 467
           FK+ F+D DKW  LF
Sbjct: 99  FKSAFWDVDKWRTLF 113


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +3

Query: 486 YVVLTSKHHEGFTLFPSKRSFSWNSVEVGPKRDI 587
           +++  +  +  F+L+P K +F  N V   P+R +
Sbjct: 305 FIIFPTHFYCAFSLYPLKSTFYLNVVRPFPERSM 338


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +1

Query: 289 GASILCPVLD--PNGFGAIGKVVTDNASIS 372
           G   L  ++D  PN  G    VVTD ASIS
Sbjct: 181 GLETLSQLMDVYPNNDGTKCLVVTDEASIS 210


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 333 SKTIRIQNRAQNRRPNV 283
           ++T+R++NR   R+ NV
Sbjct: 9   TRTVRLRNRVGKRKGNV 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,456
Number of Sequences: 336
Number of extensions: 4721
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)