Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J04
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_05_0009 - 20048736-20049423,20049504-20049743,20049832-20050385     58   1e-08
04_04_0784 - 28044883-28045654,28046626-28046859,28047328-28047875     54   1e-07
12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110     30   2.0  
07_03_1012 + 23295976-23296264,23296475-23296548,23296972-232969...    29   4.7  
07_01_0251 + 1874148-1874311,1874367-1874429,1874484-1874709,187...    28   8.2  

>09_05_0009 - 20048736-20049423,20049504-20049743,20049832-20050385
          Length = 493

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = +3

Query: 399 TYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNSVEVGPK 578
           T +E   AF+    D  +W D    AGA  VVL +KHH+GF L+PS  + + +SV   P 
Sbjct: 72  TGREPPAAFRPAALDASQWMDAAAAAGASLVVLVAKHHDGFCLWPS--AHTAHSVRASPW 129

Query: 579 R----DIVGDLAKAVRNTSLKFGVYHSLYE 656
           R    D+V + A A R   L  G+Y S ++
Sbjct: 130 RGGRGDVVREFADAARARGLDIGIYLSPWD 159


>04_04_0784 - 28044883-28045654,28046626-28046859,28047328-28047875
          Length = 517

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
 Frame = +3

Query: 423 FKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNSVEVGPKR----DIV 590
           F     D  +WA      G   VVLT+KHH+GF L+PS  + +  SV   P +    D+V
Sbjct: 78  FAPSALDAGQWARAAAAGGFGRVVLTAKHHDGFCLWPS--ALTNYSVAASPWKGGAGDVV 135

Query: 591 GDLAKAVRNTSLKFGVYHSLYEWFXPIY 674
           G+LA A R   +  G+Y S ++   P+Y
Sbjct: 136 GELAAAARAEGIGLGLYLSPWDRHEPVY 163


>12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110
          Length = 530

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 287 LGRLFCARF-WIRMVLEQLERW*PTMHRFHDEKL-SSRIHLSG 409
           +GR+FC R    R  LEQL RW   +HR     +  + +HL G
Sbjct: 179 IGRVFCFRVETTRWSLEQLNRWCAALHRGRARVIVVANLHLPG 221


>07_03_1012 +
           23295976-23296264,23296475-23296548,23296972-23296996,
           23297486-23297568,23297653-23297685,23298322-23298469,
           23298625-23298722
          Length = 249

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +3

Query: 363 IDFMTKNYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHE 515
           +D + + + P  T  +   A KA   +PD +  L    G  Y+   +KH E
Sbjct: 188 MDILREGWSPALTISKVLLAIKAIITNPDPYCPLVPSIGHLYLTDRTKHDE 238


>07_01_0251 +
           1874148-1874311,1874367-1874429,1874484-1874709,
           1874830-1875081,1875158-1875267,1875720-1875815,
           1875898-1875985,1876246-1876475,1876745-1876929,
           1877136-1877335,1877592-1877924,1878058-1878159,
           1878869-1879166,1879626-1879774,1879859-1880143,
           1880531-1880728
          Length = 992

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 609 VRNTSLKFGVYHSLYEWFXPIYEE 680
           +RN  L    YH+LYEW+  +  E
Sbjct: 774 IRNNLLATSGYHTLYEWYRKVESE 797


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,247,492
Number of Sequences: 37544
Number of extensions: 512436
Number of successful extensions: 1102
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)