Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J04
         (849 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119638-1|AAM50292.1|  494|Drosophila melanogaster RE43246p pro...   250   1e-66
AE014296-1964|AAO41255.1|  494|Drosophila melanogaster CG6128-PB...   250   1e-66
AE014296-1963|AAF50054.2|  494|Drosophila melanogaster CG6128-PA...   250   1e-66
AE014298-1831|AAF48217.1|  843|Drosophila melanogaster CG15721-P...    29   6.1  

>AY119638-1|AAM50292.1|  494|Drosophila melanogaster RE43246p
           protein.
          Length = 494

 Score =  250 bits (613), Expect = 1e-66
 Identities = 114/211 (54%), Positives = 146/211 (69%), Gaps = 3/211 (1%)
 Frame = +3

Query: 219 WNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMTKNYPPG 395
           W  LD RPLP+WYD AK+GIFLH+GVYSVP FGSEWFW+NWK   N + + FM +NY P 
Sbjct: 38  WASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQRNYKPD 97

Query: 396 FTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNSVEVGP 575
           FTYQEFA  F AE F+  KWA LF  +GA+YVVLTSKHH+GFTL+PSK S+ WNS++VGP
Sbjct: 98  FTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNSMDVGP 157

Query: 576 KRDIVGDLAKAVRNTS-LKFGVYHSLYEWFXPIYEEDKRKAFKTQTYVDTKLWPDINRSX 752
           KRDIV +LA A+R  S L+FG+Y+SL+EWF P++ +DK      Q +V+ K+ P+     
Sbjct: 158 KRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLWTDDKLHLLMQQHFVERKVRPEQMELV 217

Query: 753 RLQAPRFMV*RG-LGXXXXYWRXXDLLAXLY 842
           +   P  +   G       YWR  + +A LY
Sbjct: 218 QQYLPEIIWSDGDWEAPAKYWRSEEFIAWLY 248


>AE014296-1964|AAO41255.1|  494|Drosophila melanogaster CG6128-PB,
           isoform B protein.
          Length = 494

 Score =  250 bits (613), Expect = 1e-66
 Identities = 114/211 (54%), Positives = 146/211 (69%), Gaps = 3/211 (1%)
 Frame = +3

Query: 219 WNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMTKNYPPG 395
           W  LD RPLP+WYD AK+GIFLH+GVYSVP FGSEWFW+NWK   N + + FM +NY P 
Sbjct: 38  WASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQRNYKPD 97

Query: 396 FTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNSVEVGP 575
           FTYQEFA  F AE F+  KWA LF  +GA+YVVLTSKHH+GFTL+PSK S+ WNS++VGP
Sbjct: 98  FTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNSMDVGP 157

Query: 576 KRDIVGDLAKAVRNTS-LKFGVYHSLYEWFXPIYEEDKRKAFKTQTYVDTKLWPDINRSX 752
           KRDIV +LA A+R  S L+FG+Y+SL+EWF P++ +DK      Q +V+ K+ P+     
Sbjct: 158 KRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLWTDDKLHLLMQQHFVERKVRPEQMELV 217

Query: 753 RLQAPRFMV*RG-LGXXXXYWRXXDLLAXLY 842
           +   P  +   G       YWR  + +A LY
Sbjct: 218 QQYLPEIIWSDGDWEAPAKYWRSEEFIAWLY 248


>AE014296-1963|AAF50054.2|  494|Drosophila melanogaster CG6128-PA,
           isoform A protein.
          Length = 494

 Score =  250 bits (613), Expect = 1e-66
 Identities = 114/211 (54%), Positives = 146/211 (69%), Gaps = 3/211 (1%)
 Frame = +3

Query: 219 WNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMTKNYPPG 395
           W  LD RPLP+WYD AK+GIFLH+GVYSVP FGSEWFW+NWK   N + + FM +NY P 
Sbjct: 38  WASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQRNYKPD 97

Query: 396 FTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNSVEVGP 575
           FTYQEFA  F AE F+  KWA LF  +GA+YVVLTSKHH+GFTL+PSK S+ WNS++VGP
Sbjct: 98  FTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNSMDVGP 157

Query: 576 KRDIVGDLAKAVRNTS-LKFGVYHSLYEWFXPIYEEDKRKAFKTQTYVDTKLWPDINRSX 752
           KRDIV +LA A+R  S L+FG+Y+SL+EWF P++ +DK      Q +V+ K+ P+     
Sbjct: 158 KRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLWTDDKLHLLMQQHFVERKVRPEQMELV 217

Query: 753 RLQAPRFMV*RG-LGXXXXYWRXXDLLAXLY 842
           +   P  +   G       YWR  + +A LY
Sbjct: 218 QQYLPEIIWSDGDWEAPAKYWRSEEFIAWLY 248


>AE014298-1831|AAF48217.1|  843|Drosophila melanogaster CG15721-PA
           protein.
          Length = 843

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +3

Query: 483 KYVVLTSKHHEGFTLFPSKRSFSWNSVEVGPKRDIVGDLAKAVRNTSLKFGVYHS 647
           KY+   S  H   T  PSK S S N+V+V P+++     +     T   F  Y+S
Sbjct: 343 KYITTASPQHATTTARPSKPSLSINAVQV-PEQEAEKTTSTEPTTTYKSFNSYNS 396


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,624,492
Number of Sequences: 53049
Number of extensions: 841257
Number of successful extensions: 1741
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)