Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J04
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.67 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   6.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   6.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   8.2  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   8.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   8.2  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +3

Query: 486 YVVLTSKHHEGFTLFPSKRSFSWNSVEVGPKRDIVGDLAKAVRN 617
           Y ++++K  E F L        W+S +  P+R I   L +  R+
Sbjct: 348 YNIMSNKFREAFKLMLPNCCGKWSSQKSEPRRSIYSSLLRYPRS 391


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 366 DFMTKNYPPGFTYQEFAPAFKAEFFDPDKWADLFVK 473
           D + K YPP  T Q  +    ++  +PD  ++  +K
Sbjct: 336 DNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFAMK 371


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 366 DFMTKNYPPGFTYQEFAPAFKAEFFDPDKWADLFVK 473
           D + K YPP  T Q  +    ++  +PD  ++  +K
Sbjct: 336 DNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFAMK 371


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 291 GVYSVPGFGSEWFWS 335
           G +S+P FG+ W +S
Sbjct: 55  GPFSLPIFGTRWIFS 69


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 580 RFGPTSTEFQLNERFDGNK 524
           +F P   + +    FDGNK
Sbjct: 182 KFNPAKVKLRFENLFDGNK 200


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 252 TLATVVYPNRSNXGEYRLFSILLCE 178
           TL   V P+R++  EYRL++  L +
Sbjct: 411 TLRPQVSPDRTSPMEYRLYNPALIQ 435


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,093
Number of Sequences: 438
Number of extensions: 5128
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)