Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J03
         (849 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...    82   6e-16
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    32   0.45 
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    32   0.45 
AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical ...    29   4.2  
AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score = 81.8 bits (193), Expect = 6e-16
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
 Frame = +3

Query: 171 KGYHFGVFKLDLKTKSESG--VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNT 344
           KGY+FG  K+D  T++     VEF S  + N  SGK+ G+L  K+ +  YG+T TEKWNT
Sbjct: 19  KGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLDVKYKIPQYGITLTEKWNT 78

Query: 345 DNTLATDITIQDKIAAGLKVTLXRHFCP 428
           +N L T I + ++   GLKVTL   + P
Sbjct: 79  ENQLGTVIEVNEQFGRGLKVTLDSLYAP 106



 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 29/96 (30%), Positives = 48/96 (50%)
 Frame = +1

Query: 400 KSPLXGTFAPQTGTKTGELKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHT 579
           K  L   +AP  G ++G++K  +   T  V  ++ +  A PV++ A V +  GWL G   
Sbjct: 97  KVTLDSLYAPHAGKRSGKVKLDWALPTARVTADVGVTSA-PVINAAGVFSRDGWLIGAAA 155

Query: 580 QFDTQKAKFSKNNFALGYQSGDFALHTSVDNGKDSG 687
            FD+   K +  + A G+ +  + LH+ V N  D G
Sbjct: 156 TFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFG 191



 Score = 33.1 bits (72), Expect = 0.26
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 116 MAPPYYADLGKKANDVFXQG 175
           MAPP +ADLGK A D+F +G
Sbjct: 1   MAPPTFADLGKSAKDLFNKG 20



 Score = 27.9 bits (59), Expect = 9.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 681 FGGSIYQKVSDKLDCGVSMKWTAG 752
           FG S+Y KV+  ++ G  + W  G
Sbjct: 190 FGASLYHKVASNVEVGTQLGWKVG 213


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
            T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 210  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 365
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
            protein T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 210  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 365
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1b protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 228 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 368
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1a protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 228 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 368
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 273 VFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 368
           VFG LSS     DYG+T   K+ TD      I
Sbjct: 252 VFGELSSSKKTIDYGITKQWKYRTDGRFELSI 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,830,604
Number of Sequences: 27780
Number of extensions: 389406
Number of successful extensions: 898
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)