Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_J02
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              37   0.079
BC107478-1|AAI07479.1|  416|Homo sapiens C6orf205 protein protein.     36   0.14 
BC105737-1|AAI05738.1|  566|Homo sapiens chromosome 6 open readi...    36   0.14 
BC105735-1|AAI05736.1|  566|Homo sapiens chromosome 6 open readi...    36   0.14 
AY358415-1|AAQ88781.1|  596|Homo sapiens KMQK697 protein.              36   0.14 
AL773541-7|CAI18456.1|  626|Homo sapiens chromosome 6 open readi...    36   0.14 
AL669830-8|CAI18008.1|  566|Homo sapiens chromosome 6 open readi...    36   0.14 
AL663093-1|CAI17705.1|  566|Homo sapiens chromosome 6 open readi...    36   0.14 
Z34277-1|CAA84031.1|  477|Homo sapiens mucin protein.                  34   0.56 
BC057847-1|AAH57847.1|  388|Homo sapiens chromosome X open readi...    32   3.0  
BC017665-1|AAH17665.2|  388|Homo sapiens chromosome X open readi...    32   3.0  
AL135959-1|CAI42479.1|  388|Homo sapiens chromosome X open readi...    32   3.0  
Y10351-1|CAA71377.1|  711|Homo sapiens nuclear protein SDK3 prot...    30   9.0  
Y09703-1|CAA70874.1|  586|Homo sapiens MEMA protein.                   30   9.0  
U77718-1|AAB48304.1|  743|Homo sapiens pinin protein.                  30   9.0  
U59479-1|AAB03391.1|   99|Homo sapiens neutrophil protein protein.     30   9.0  
BC062602-1|AAH62602.1|  717|Homo sapiens pinin, desmosome associ...    30   9.0  
AK223612-1|BAD97332.1|  717|Homo sapiens pinin, desmosome associ...    30   9.0  
AF112222-1|AAF17209.1|  717|Homo sapiens nuclear protein SDK3 pr...    30   9.0  

>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 37.1 bits (82), Expect = 0.079
 Identities = 22/62 (35%), Positives = 31/62 (50%)
 Frame = -1

Query: 435 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSS 256
           ST  S T S+ ++   +  +A   STT T    + SAA  +  S   T  S +TT S +S
Sbjct: 413 STTSSPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSAATSSTTSSSGTTPSPVTTTSTAS 472

Query: 255 VS 250
           VS
Sbjct: 473 VS 474



 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = -1

Query: 435  STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSS 256
            ST  ++T S+I++   +  ++   STT T    + SAA  +  S   T  S + T S +S
Sbjct: 1152 STISASTTSTISAPTTSTISSPTSSTTSTPQTSKTSAATSSTTSGSGTTPSPVPTTSTTS 1211

Query: 255  VS 250
             S
Sbjct: 1212 AS 1213


>BC107478-1|AAI07479.1|  416|Homo sapiens C6orf205 protein protein.
          Length = 416

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 435 STRISATESSITSEAQTAAAAKGEST-TETESIRRVSAAKGNAASRKAT*GSRMTTNSNS 259
           ST  S   ++ TSE+ T ++    +T +E+ ++   ++   N+ S   + G+   TNS S
Sbjct: 231 STVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGS 290

Query: 258 SVSAADRGRA 229
           SV++A  G A
Sbjct: 291 SVTSAGSGTA 300


>BC105737-1|AAI05738.1|  566|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 566

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 435 STRISATESSITSEAQTAAAAKGEST-TETESIRRVSAAKGNAASRKAT*GSRMTTNSNS 259
           ST  S   ++ TSE+ T ++    +T +E+ ++   ++   N+ S   + G+   TNS S
Sbjct: 381 STVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGS 440

Query: 258 SVSAADRGRA 229
           SV++A  G A
Sbjct: 441 SVTSAGSGTA 450


>BC105735-1|AAI05736.1|  566|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 566

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 435 STRISATESSITSEAQTAAAAKGEST-TETESIRRVSAAKGNAASRKAT*GSRMTTNSNS 259
           ST  S   ++ TSE+ T ++    +T +E+ ++   ++   N+ S   + G+   TNS S
Sbjct: 381 STVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGS 440

Query: 258 SVSAADRGRA 229
           SV++A  G A
Sbjct: 441 SVTSAGSGTA 450


>AY358415-1|AAQ88781.1|  596|Homo sapiens KMQK697 protein.
          Length = 596

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 26/73 (35%), Positives = 39/73 (53%)
 Frame = -1

Query: 447 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 268
           S+  ST  ++  S+ +SEA TA     ES+T +  I  V+    N+ S   + G+   TN
Sbjct: 414 SSGASTATNSDSSTTSSEASTAT--NSESSTVSSGISTVT----NSESSTTSSGANTATN 467

Query: 267 SNSSVSAADRGRA 229
           S SSV++A  G A
Sbjct: 468 SGSSVTSAGSGTA 480


>AL773541-7|CAI18456.1|  626|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 626

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 26/73 (35%), Positives = 39/73 (53%)
 Frame = -1

Query: 447 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 268
           S+  ST  ++  S+ +SEA TA     ES+T +  I  V+    N+ S   + G+   TN
Sbjct: 444 SSGASTATNSDSSTTSSEASTAT--NSESSTVSSGISTVT----NSESSTTSSGANTATN 497

Query: 267 SNSSVSAADRGRA 229
           S SSV++A  G A
Sbjct: 498 SGSSVTSAGSGTA 510


>AL669830-8|CAI18008.1|  566|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 566

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 435 STRISATESSITSEAQTAAAAKGEST-TETESIRRVSAAKGNAASRKAT*GSRMTTNSNS 259
           ST  S   ++ TSE+ T ++    +T +E+ ++   ++   N+ S   + G+   TNS S
Sbjct: 381 STVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGS 440

Query: 258 SVSAADRGRA 229
           SV++A  G A
Sbjct: 441 SVTSAGSGTA 450


>AL663093-1|CAI17705.1|  566|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 566

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 435 STRISATESSITSEAQTAAAAKGEST-TETESIRRVSAAKGNAASRKAT*GSRMTTNSNS 259
           ST  S   ++ TSE+ T ++    +T +E+ ++   ++   N+ S   + G+   TNS S
Sbjct: 381 STVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGS 440

Query: 258 SVSAADRGRA 229
           SV++A  G A
Sbjct: 441 SVTSAGSGTA 450


>Z34277-1|CAA84031.1|  477|Homo sapiens mucin protein.
          Length = 477

 Score = 34.3 bits (75), Expect = 0.56
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -1

Query: 435 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSS 256
           ST    T S+ ++   +  +A   STT T    + SAA  +  S   T  S +TT S +S
Sbjct: 237 STTSFPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSAATSSTTSGSGTTPSPVTTTSTAS 296

Query: 255 VS 250
           VS
Sbjct: 297 VS 298


>BC057847-1|AAH57847.1|  388|Homo sapiens chromosome X open reading
           frame 39 protein.
          Length = 388

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = -1

Query: 411 SSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSSVSAADRGR 232
           +S +  +  +A+A   S +   S     ++ GN+AS  +   SR  ++SN S SAA+R R
Sbjct: 270 ASTSGVSGASASASSSSASMVSSASSSGSSVGNSASNSSANMSRAHSDSNLSASAAERIR 329


>BC017665-1|AAH17665.2|  388|Homo sapiens chromosome X open reading
           frame 39 protein.
          Length = 388

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = -1

Query: 411 SSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSSVSAADRGR 232
           +S +  +  +A+A   S +   S     ++ GN+AS  +   SR  ++SN S SAA+R R
Sbjct: 270 ASTSGVSGASASASSSSASMVSSASSSGSSVGNSASNSSANMSRAHSDSNLSASAAERIR 329


>AL135959-1|CAI42479.1|  388|Homo sapiens chromosome X open reading
           frame 39 protein.
          Length = 388

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = -1

Query: 411 SSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSSVSAADRGR 232
           +S +  +  +A+A   S +   S     ++ GN+AS  +   SR  ++SN S SAA+R R
Sbjct: 270 ASTSGVSGASASASSSSASMVSSASSSGSSVGNSASNSSANMSRAHSDSNLSASAAERIR 329


>Y10351-1|CAA71377.1|  711|Homo sapiens nuclear protein SDK3
           protein.
          Length = 711

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 388 NRCRRQGRVHHRDRVHQKSV--RRQGKCCLQKGH 293
           +R R +GR H+RDR H++SV  +R+    L++ H
Sbjct: 625 SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSH 658


>Y09703-1|CAA70874.1|  586|Homo sapiens MEMA protein.
          Length = 586

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 388 NRCRRQGRVHHRDRVHQKSV--RRQGKCCLQKGH 293
           +R R +GR H+RDR H++SV  +R+    L++ H
Sbjct: 500 SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSH 533


>U77718-1|AAB48304.1|  743|Homo sapiens pinin protein.
          Length = 743

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 388 NRCRRQGRVHHRDRVHQKSV--RRQGKCCLQKGH 293
           +R R +GR H+RDR H++SV  +R+    L++ H
Sbjct: 657 SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSH 690


>U59479-1|AAB03391.1|   99|Homo sapiens neutrophil protein protein.
          Length = 99

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 388 NRCRRQGRVHHRDRVHQKSV--RRQGKCCLQKGH 293
           +R R +GR H+RDR H++SV  +R+    L++ H
Sbjct: 13  SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSH 46


>BC062602-1|AAH62602.1|  717|Homo sapiens pinin, desmosome
           associated protein protein.
          Length = 717

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 388 NRCRRQGRVHHRDRVHQKSV--RRQGKCCLQKGH 293
           +R R +GR H+RDR H++SV  +R+    L++ H
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSH 664


>AK223612-1|BAD97332.1|  717|Homo sapiens pinin, desmosome
           associated protein variant protein.
          Length = 717

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 388 NRCRRQGRVHHRDRVHQKSV--RRQGKCCLQKGH 293
           +R R +GR H+RDR H++SV  +R+    L++ H
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSH 664


>AF112222-1|AAF17209.1|  717|Homo sapiens nuclear protein SDK3
           protein.
          Length = 717

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 388 NRCRRQGRVHHRDRVHQKSV--RRQGKCCLQKGH 293
           +R R +GR H+RDR H++SV  +R+    L++ H
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSH 664


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,998,810
Number of Sequences: 237096
Number of extensions: 1807004
Number of successful extensions: 5635
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5630
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)