Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I24
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro...    29   4.1  
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical...    29   4.1  

>Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical
           protein F18E2.1 protein.
          Length = 455

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 398 VIAPAHKVLVAGHHEEEYAH-PKYDFAYSVADGHSGDNKSQHESRDGDAVH 547
           +I+    +++AG+HE++Y +   Y   +SV D  +G N +Q  S D   VH
Sbjct: 175 LISKVPYMVIAGNHEDDYQNFTNYQKRFSVPD--NGHNDNQFYSFDLGPVH 223


>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
           preproprotein protein.
          Length = 1042

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -2

Query: 666 ELRVSGXGVANNSVEAR-GGRQRCTQPCALSRQLRAKVYSPCTA 538
           ELR  G GV + S E   G R+ C  PC        + ++ C A
Sbjct: 436 ELRECGNGVVDGSEECDCGSRENCQDPCCDPLTCTLRPHAQCAA 479


>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y37D8A.13 protein.
          Length = 1042

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -2

Query: 666 ELRVSGXGVANNSVEAR-GGRQRCTQPCALSRQLRAKVYSPCTA 538
           ELR  G GV + S E   G R+ C  PC        + ++ C A
Sbjct: 436 ELRECGNGVVDGSEECDCGSRENCQDPCCDPLTCTLRPHAQCAA 479


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,332,439
Number of Sequences: 27780
Number of extensions: 184564
Number of successful extensions: 647
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)