Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I23
         (845 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g25757.1 68418.m03055 expressed protein                            176   2e-44
At5g25754.1 68418.m03054 expressed protein                            176   2e-44
At2g26380.1 68415.m03166 disease resistance protein-related / LR...    30   1.7  
At5g16500.1 68418.m01928 protein kinase family protein contains ...    28   6.8  
At3g43300.1 68416.m04570 guanine nucleotide exchange family prot...    28   6.8  
At1g33590.1 68414.m04158 disease resistance protein-related / LR...    28   9.0  

>At5g25757.1 68418.m03055 expressed protein
          Length = 514

 Score =  176 bits (428), Expect = 2e-44
 Identities = 85/198 (42%), Positives = 128/198 (64%), Gaps = 3/198 (1%)
 Frame = +1

Query: 178 AQSTEHYEPEYDRSSYYK---MPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKY 348
           A S E+ E   +R S Y    +PD VK F+ +    I +   YEI  + E +F +++E+ 
Sbjct: 2   ASSNEYEEGPGERESGYDPNMVPDSVKSFVSHMYRHIRDKNVYEIHQMCETSFQSISERL 61

Query: 349 FENTPWPDEDEVSPIVDNDNVFMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNY 528
           F++TPWP  + ++P VDND+VF +LY+E+++R +YAR+   P  +QR  S+ NYC LF  
Sbjct: 62  FKDTPWPSVEAIAPYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSYDNYCSLFQV 119

Query: 529 ILSVTPVPLELPDQWLWELIDEFVYQFQSFAQYRSRTTKLSPAEIEALNTENKAWNVLCI 708
           +L    V ++LP+QWLW+++DEFVYQFQSF Q+R++    +  EI  L   +KAWNV  +
Sbjct: 120 VLHGV-VNMQLPNQWLWDMVDEFVYQFQSFCQFRAKLKNKTEEEIALLRQHDKAWNVYGV 178

Query: 709 LNVLHSLVDKSXIKRQLE 762
           LN L +LV+KS I + LE
Sbjct: 179 LNFLQALVEKSCIIQILE 196


>At5g25754.1 68418.m03054 expressed protein
          Length = 514

 Score =  176 bits (428), Expect = 2e-44
 Identities = 85/198 (42%), Positives = 128/198 (64%), Gaps = 3/198 (1%)
 Frame = +1

Query: 178 AQSTEHYEPEYDRSSYYK---MPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKY 348
           A S E+ E   +R S Y    +PD VK F+ +    I +   YEI  + E +F +++E+ 
Sbjct: 2   ASSNEYEEGPGERESGYDPNMVPDSVKSFVSHMYRHIRDKNVYEIHQMCETSFQSISERL 61

Query: 349 FENTPWPDEDEVSPIVDNDNVFMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNY 528
           F++TPWP  + ++P VDND+VF +LY+E+++R +YAR+   P  +QR  S+ NYC LF  
Sbjct: 62  FKDTPWPSVEAIAPYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSYDNYCSLFQV 119

Query: 529 ILSVTPVPLELPDQWLWELIDEFVYQFQSFAQYRSRTTKLSPAEIEALNTENKAWNVLCI 708
           +L    V ++LP+QWLW+++DEFVYQFQSF Q+R++    +  EI  L   +KAWNV  +
Sbjct: 120 VLHGV-VNMQLPNQWLWDMVDEFVYQFQSFCQFRAKLKNKTEEEIALLRQHDKAWNVYGV 178

Query: 709 LNVLHSLVDKSXIKRQLE 762
           LN L +LV+KS I + LE
Sbjct: 179 LNFLQALVEKSCIIQILE 196


>At2g26380.1 68415.m03166 disease resistance protein-related / LRR
           protein-related contains leucine rich-repeat domains
           Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-2A
           [Lycopersicon pimpinellifolium] gi|3894389|gb|AAC78594
          Length = 480

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -3

Query: 822 KXXXQTRQPXXSGSPPRCIYLKLTFNXRL-VYERVQNIEDAQYVPSLILSIKSFNFSWTQ 646
           K   Q R+   SG+  R    KL+F+  L   +  +N+   + VP+ +  +K+ N S   
Sbjct: 391 KGAEQLREFRMSGNKLRFDLRKLSFSTTLETLDLSRNLVFGK-VPARVAGLKTLNLSQNH 449

Query: 645 LCGTRPV 625
           LCG  PV
Sbjct: 450 LCGKLPV 456


>At5g16500.1 68418.m01928 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 636

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 118 TMYSSDDYNEGGYESYGDYEAQSTEHYEPEYD 213
           ++YS DD  E G  S    EA+  EH   ++D
Sbjct: 605 SVYSDDDAGESGESSLHRIEAKEEEHISSDHD 636


>At3g43300.1 68416.m04570 guanine nucleotide exchange family protein
           similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine
           nucleotide-exchange protein 2 {Homo sapiens}; contains
           Pfam profile PF01369: Sec7 domain
          Length = 1756

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +1

Query: 583 LIDEFVYQFQSFAQYRSRTTKLSPAEIEALNTENKAWNVLCILNVLHSLVDKSXIKRQLE 762
           L +  V      AQ  S++   +PA + +     K  ++ C++NVL SLVD   I+R+ E
Sbjct: 504 LFERMVTTLSKIAQ-GSQSADPNPA-MASQTASVKGSSLQCLVNVLKSLVDWEKIRREAE 561


>At1g33590.1 68414.m04158 disease resistance protein-related / LRR
           protein-related contains leucine rich-repeat domains
           Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D
           [Lycopersicon esculentum] gi|3894393|gb|AAC78596
          Length = 477

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 759 KLTFNXRLVYERVQNIEDAQYVPSLILSIKSFNFSWTQLCGTRPV 625
           KLTF   L    +        VP+++  +K+ N S   LCG  PV
Sbjct: 409 KLTFAKTLTTLDISRNLVFGKVPAMVAGLKTLNVSHNHLCGKLPV 453


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,027,039
Number of Sequences: 28952
Number of extensions: 344852
Number of successful extensions: 989
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)