Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I22
         (840 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical...    29   5.4  
Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    28   9.5  
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ...    28   9.5  

>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
            protein Y47G6A.29 protein.
          Length = 2460

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -1

Query: 486  LVQQISTLSWQPSSPNLTSSTPHP 415
            L QQ++ L+ QP+S  L+SSTP P
Sbjct: 2257 LEQQLNRLAAQPASTPLSSSTPFP 2280


>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 470 EICCTNPITEPVPKPQPDP 526
           ++  T P+ EPVP+P P+P
Sbjct: 107 KVAVTLPVPEPVPEPVPEP 125


>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
           protein H02F09.3 protein.
          Length = 1275

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = -1

Query: 558 GSCSRIPSTSKGSGCGFGTGSVMGLVQQISTLSWQPSSPNLTSSTPHPVTLALLTSTPSL 379
           GS +  PST  GS     TGS    V + ST+S    S  +  ST   V+ A   S  S+
Sbjct: 622 GSSTSGPSTISGSSASTVTGST---VTEASTISGSTESSTIPGSTESTVSEASTVSGSSV 678


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,600,799
Number of Sequences: 27780
Number of extensions: 367077
Number of successful extensions: 1432
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)