Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I22
(840 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g05010.1 68418.m00532 clathrin adaptor complexes medium subun... 32 0.41
At3g13400.1 68416.m01685 multi-copper oxidase type I family prot... 31 0.95
At1g55570.1 68414.m06360 multi-copper oxidase type I family prot... 29 2.9
At1g55560.1 68414.m06359 multi-copper oxidase type I family prot... 29 2.9
At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At3g13390.1 68416.m01684 multi-copper oxidase type I family prot... 29 3.8
At3g09670.1 68416.m01146 PWWP domain-containing protein 29 5.1
At2g20870.1 68415.m02459 cell wall protein precursor, putative i... 29 5.1
At4g11440.1 68417.m01842 mitochondrial substrate carrier family ... 28 6.7
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 6.7
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 6.7
At2g28670.1 68415.m03485 disease resistance-responsive family pr... 28 8.9
>At5g05010.1 68418.m00532 clathrin adaptor complexes medium
subunit-related contains pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 527
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 537 STSKGSGCGFGTGSVMGLVQQISTLSWQPSSPNLTSSTPHP 415
S S G G G+G+GS G++ + ++ +P + +S T P
Sbjct: 198 SISSGGGGGYGSGSGFGMISDVDPINTKPKDRSRSSVTAPP 238
>At3g13400.1 68416.m01685 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -1
Query: 510 FGTGSVMGLVQQISTLSWQPSSPNLTSSTPHPVTLALLTSTPSLFLL 370
+GT + +G+ QQ+ ++ Q PNL S++ + V + + + FLL
Sbjct: 35 YGTAAPLGIPQQVILINGQFPGPNLNSTSNNNVVINVFNNLDEPFLL 81
>At1g55570.1 68414.m06360 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 555
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -1
Query: 510 FGTGSVMGLVQQISTLSWQPSSPNLTSSTPHPVTLALLTSTPSLFLL 370
+GT S +G+ QQ+ ++ Q PN+ S++ + V + + + FL+
Sbjct: 37 YGTASPLGVPQQVILINGQFPGPNINSTSNNNVIVNVFNNLDEPFLI 83
>At1g55560.1 68414.m06359 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 549
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -1
Query: 510 FGTGSVMGLVQQISTLSWQPSSPNLTSSTPHPVTLALLTSTPSLFLL 370
+GT S +G+ Q++ ++ Q PNL S++ + V + + FLL
Sbjct: 34 YGTASPLGVPQKVILINGQFPGPNLNSTSNNNVVINVFNHLDEPFLL 80
>At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 476 CCTNPITEPVPKPQPD 523
CC P+ + VPKP PD
Sbjct: 60 CCLRPVLQHVPKPDPD 75
>At3g13390.1 68416.m01684 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 554
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -1
Query: 510 FGTGSVMGLVQQISTLSWQPSSPNLTSSTPHPVTLALLTSTPSLFLL 370
+GT S +G+ QQ+ ++ Q PN+ S++ + V + + + FLL
Sbjct: 36 YGTVSPLGVPQQVILINGQFPGPNVNSTSNNNVIINVFNNLDEPFLL 82
>At3g09670.1 68416.m01146 PWWP domain-containing protein
Length = 726
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 537 STSKGSGCGFGTGSVMGLVQQISTLSWQPSSPNLTSSTPHPVTLALLTSTPS 382
STSK + G+G + + LS + SP+ T S+PH ++ TS S
Sbjct: 576 STSKKAAKSNGSGKSLQEKPKAEALSAREISPSTTLSSPHAASVTKTTSGKS 627
>At2g20870.1 68415.m02459 cell wall protein precursor, putative
identical to Putative cell wall protein precursor
(Swiss-Prot:P47925) [Arabidopsis thaliana]; weak
similarity to mu-protocadherin (GI:7861967) [Rattus
norvegicus]
Length = 140
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 495 VMGLVQQISTLSWQPSSPNLTSSTPHPVTLALLTSTPSLFL 373
V+G V+Q+S L P SP T+ HP L + P++ +
Sbjct: 18 VLGSVEQVSGLRHVPKSPK-TTDVKHPDFLVTIEPKPTILI 57
>At4g11440.1 68417.m01842 mitochondrial substrate carrier family
protein
Length = 550
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 275 NLEDIIVKPTESNSVFTDKNGESCKCV 355
N E I+ P S +NG+ C CV
Sbjct: 184 NFEGCILNPVSSKEELASRNGDGCDCV 210
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 365 LCNKNNEGVDVNNASVTGWGVLDVRFGEEGCQESVEIC---CTNPITEPVPKPQPDPFEV 535
LC K +E + T WG+L + F EEG + I T P+ E ++
Sbjct: 424 LCEKKSEETESEEEKET-WGLLKIMFEEEGTSRTKLISHLGFTLPVAEKDQAVDGLSSDL 482
Query: 536 EGMRLQE 556
G+RL++
Sbjct: 483 NGIRLED 489
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 365 LCNKNNEGVDVNNASVTGWGVLDVRFGEEGCQESVEIC---CTNPITEPVPKPQPDPFEV 535
LC K +E + T WG+L + F EEG + I T P+ E ++
Sbjct: 426 LCEKKSEETESEEEKET-WGLLKIMFEEEGTSRTKLISHLGFTLPVAEKDQAVDGLSSDL 484
Query: 536 EGMRLQE 556
G+RL++
Sbjct: 485 NGIRLED 491
>At2g28670.1 68415.m03485 disease resistance-responsive family
protein / fibroin-related contains similarity to silk
fibroin heavy chain [Bombyx mori] gi|765323|gb|AAB31861;
contains disease resistance response protien domain
Pfam:FP03018
Length = 447
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 558 GSCSRIPSTSKGSGCGFGTGSVMG 487
G +P+T +G G GTGS +G
Sbjct: 111 GGSGSLPTTGSATGAGAGTGSALG 134
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,759,474
Number of Sequences: 28952
Number of extensions: 332120
Number of successful extensions: 968
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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