Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I20
         (818 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    37   0.70 
UniRef50_A1DBY8 Cluster: Putative uncharacterized protein; n=1; ...    35   2.8  
UniRef50_A0BHV3 Cluster: Chromosome undetermined scaffold_109, w...    34   3.8  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 36.7 bits (81), Expect = 0.70
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +1

Query: 196 WYLPARTHKRSYHQ 237
           WYLPARTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_A1DBY8 Cluster: Putative uncharacterized protein; n=1;
           Neosartorya fischeri NRRL 181|Rep: Putative
           uncharacterized protein - Neosartorya fischeri (strain
           ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
           fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
          Length = 327

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -1

Query: 500 GR*LCSVYELWYHLCIYINKISICCEFAFLSH-PSVCEEI*YSYFCDSGSTYDKWKAIQ 327
           GR  C  YE+W   C Y   ++ CC+ A+ +H  SV  +     FC +      W  +Q
Sbjct: 256 GRYGCFGYEIWCLTCFYCVSVAACCKRAWQAHQDSVFADCSIVPFCQTAGNELVWPRMQ 314


>UniRef50_A0BHV3 Cluster: Chromosome undetermined scaffold_109,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_109,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 735

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
 Frame = +2

Query: 266 IDHKVSQRSIS*NILKYRRYFELLSTYRMLI---------LNHKNNCIKFLHKRMDDLET 418
           I   + Q+SI+ N+ K R+Y E L  Y   +         LN K NC++ +HK  + LET
Sbjct: 444 ISGNLHQQSIADNLKKDRKYEEALKLYEKALEKYPNDIPSLNGKANCLRLMHKFPESLET 503


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,380,856
Number of Sequences: 1657284
Number of extensions: 13185566
Number of successful extensions: 21834
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21833
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 71200899835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)