Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I20
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.9  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 246 KYLLVVGPLMSPRG*VPPPYLFLP*SS 166
           K  + +G    P    PPPY F P +S
Sbjct: 191 KRTIALGAFYQPLQPFPPPYPFYPGTS 217


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +3

Query: 495  PSGFNCLKFNYI-RLTINHKYVYRIV 569
            P  FNCLK+  I  +T+   Y+  ++
Sbjct: 996  PQEFNCLKYGVIYYVTVPSMYLLLVI 1021


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +3

Query: 495  PSGFNCLKFNYI-RLTINHKYVYRIV 569
            P  FNCLK+  I  +T+   Y+  ++
Sbjct: 996  PQEFNCLKYGVIYYVTVPSMYLLLVI 1021


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 518 FQTIETGR*LCSVYELWYHL 459
           F  IE    +C  Y+LW H+
Sbjct: 300 FDPIEKIADVCQKYKLWLHV 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,310
Number of Sequences: 336
Number of extensions: 3852
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)