Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I20
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_05_0006 - 20030673-20030895,20031432-20031478,20031597-200316...    29   5.9  

>09_05_0006 -
           20030673-20030895,20031432-20031478,20031597-20031665,
           20032590-20032725,20032900-20033067,20034286-20034354,
           20034535-20034631,20034742-20034820,20035702-20035872
          Length = 352

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +2

Query: 284 QRSIS*NILKYRRYFELLSTYRMLILNHKNNCIKF 388
           +R +  N++++R + E +S   ML  +HK +C+ F
Sbjct: 77  ERPLLRNVVRFREWEENVSYLFMLCFHHKKSCVVF 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,695,629
Number of Sequences: 37544
Number of extensions: 329285
Number of successful extensions: 486
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)