Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I20
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF014939-2|ABA00177.1|  537|Caenorhabditis elegans Hypothetical ...    33   0.32 
AF014939-1|AAB63926.1|  578|Caenorhabditis elegans Hypothetical ...    33   0.32 

>AF014939-2|ABA00177.1|  537|Caenorhabditis elegans Hypothetical
           protein ZC132.3b protein.
          Length = 537

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -2

Query: 700 FVQNQSFKCHAVSRYTNTASEGLAKVQTI-LMNAFLHFFLIDTS*TIRYTYLWLIVSRI 527
           FV++QSF    +S+Y N     +  V  I L+N   HFF +    T+ +  +W+ +  I
Sbjct: 335 FVEDQSFLTPLISKYRNITKRIVTVVNGIALVNGLSHFFNVGWLVTVLWYPMWIALYSI 393


>AF014939-1|AAB63926.1|  578|Caenorhabditis elegans Hypothetical
           protein ZC132.3a protein.
          Length = 578

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -2

Query: 700 FVQNQSFKCHAVSRYTNTASEGLAKVQTI-LMNAFLHFFLIDTS*TIRYTYLWLIVSRI 527
           FV++QSF    +S+Y N     +  V  I L+N   HFF +    T+ +  +W+ +  I
Sbjct: 335 FVEDQSFLTPLISKYRNITKRIVTVVNGIALVNGLSHFFNVGWLVTVLWYPMWIALYSI 393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,315
Number of Sequences: 27780
Number of extensions: 338978
Number of successful extensions: 586
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)