Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I19
         (850 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0850 - 25354002-25354391,25354480-25354575,25355352-253556...    47   2e-05
10_08_0654 - 19616426-19616656,19617046-19617249,19617654-196178...    36   0.031
04_04_1541 + 34249778-34249882,34249964-34250115,34250225-342503...    33   0.38 
06_01_0903 - 6939672-6939782,6940051-6940110,6940221-6940322,694...    32   0.66 
11_04_0315 + 16306053-16306753,16306779-16308479,16308894-16309257     30   2.0  
08_02_1480 + 27401923-27402158,27402847-27402982,27403119-274031...    28   8.2  
08_02_1473 - 27358162-27358275,27358968-27359024,27359102-273592...    28   8.2  

>06_03_0850 -
           25354002-25354391,25354480-25354575,25355352-25355634,
           25357213-25357799
          Length = 451

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = +1

Query: 157 SANREDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYENG-GNADEAPAN 315
           +A  +  +  FC VT A    + FFLES NW L+ A+ SFY++  G+A  A A+
Sbjct: 12  AAEAQSLVESFCGVTSATPQEAAFFLESHNWALESAVRSFYDSADGDASAAAAD 65


>10_08_0654 -
           19616426-19616656,19617046-19617249,19617654-19617824,
           19619617-19620411
          Length = 466

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 154 MSANREDTLRQFCDVTG-ADEDRSKFFLESSNWQLDVALSSFYENGGNADEAPANP 318
           M+   +D +  F  VTG +D D     L + NW L +A+SS   N  + D AP+ P
Sbjct: 1   MAETVDDKVSYFQAVTGISDHDLCTEILAAHNWDLQLAVSSITANPSSPDPAPSAP 56


>04_04_1541 +
           34249778-34249882,34249964-34250115,34250225-34250350,
           34251868-34252030,34252601-34252678,34252749-34252847,
           34253045-34253188,34253344-34253446,34255303-34255646,
           34255727-34255891
          Length = 492

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 160 ANREDTLRQFCDVT-GADEDRSKFFLESSNWQLDVALSSFYENGGNADEAPANPTSAAS 333
           A +E  +  F ++  G   + +  FL+ ++W L+ AL  FY +G  A  A   P+ AA+
Sbjct: 9   AEKESLVTSFLEIAAGQTPETATQFLQMTSWHLEEALQLFYIDGEAALAAHPAPSPAAA 67


>06_01_0903 -
           6939672-6939782,6940051-6940110,6940221-6940322,
           6940464-6940513,6940686-6940750,6940849-6940931,
           6941117-6941140,6941798-6941856,6942041-6942174,
           6942823-6942884,6942908-6942976
          Length = 272

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 172 DTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFY 279
           D ++QF  +TGA E  +   L++S+W L+ A   FY
Sbjct: 32  DKVQQFMTITGASEKVALQALKASDWHLEGAFDFFY 67


>11_04_0315 + 16306053-16306753,16306779-16308479,16308894-16309257
          Length = 921

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 125 LIQNIYSKLPCLRIEKIHYVSFVMLP 202
           LI NI  KLPCLR+  + Y     LP
Sbjct: 404 LIDNILPKLPCLRVLDLSYTQLESLP 429


>08_02_1480 +
           27401923-27402158,27402847-27402982,27403119-27403168,
           27403810-27403813,27404394-27404494,27405084-27406305
          Length = 582

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +3

Query: 384 GTKVPEKRKKEN--LKYKVWDHRIAAAGKLKR*GRR 485
           GTK P  R+K    L  + W+H  ++ GKL+  GR+
Sbjct: 81  GTKSPWSRRKRKRPLSCRHWNHLFSSDGKLRDGGRK 116


>08_02_1473 -
           27358162-27358275,27358968-27359024,27359102-27359245,
           27359770-27359934,27360020-27360208,27360301-27360535,
           27360826-27360932,27361020-27361103,27361185-27361695,
           27361793-27361854,27363373-27363456
          Length = 583

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 169 EDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYENGG-NADEAPANP 318
           +D +  F  +TGADE  +   LE  +  L+ A+++++  G   +  A  NP
Sbjct: 6   QDAIDTFVGITGADEAVAARKLEEHHGDLNEAVNAYFNEGDRTSTRANENP 56


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,401,596
Number of Sequences: 37544
Number of extensions: 307389
Number of successful extensions: 721
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)