Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I19
         (850 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_9533| Best HMM Match : No HMM Matches (HMM E-Value=.)               39   0.006
SB_54572| Best HMM Match : CARDB (HMM E-Value=4.4)                     31   0.89 
SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)                     31   1.6  
SB_34771| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.6  
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.6  
SB_23539| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19)                    28   8.3  
SB_57910| Best HMM Match : SAPS (HMM E-Value=2.8)                      28   8.3  

>SB_9533| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 593

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +1

Query: 169 EDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYE 282
           ++TL +F D TGAD   ++ FL+ +NW  + AL +F E
Sbjct: 2   DETLSRFVDRTGADPALARDFLQGTNWNFEEALKAFQE 39


>SB_54572| Best HMM Match : CARDB (HMM E-Value=4.4)
          Length = 292

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 226 FFLESSNWQLDVALSSFYENGGNADEAPA 312
           FFL+ +NW L  A+ +FY+   + D+ P+
Sbjct: 45  FFLDMANWNLQAAIGAFYDFNCSNDKLPS 73


>SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 824

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 257 MLLFQVSMRTVVMQMRLQLIQRVRHHSLFCQTAI-WNHRPSHL 382
           + L+ V    +++   + + + +RHH+L  QT I  NHR  HL
Sbjct: 564 LFLYVVLSMAIIIASYISVSKTIRHHNLHLQTTIVLNHRLGHL 606


>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
          Length = 825

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 145 EITMSANREDTLRQFCDVTGADEDRSKFFLES 240
           ++T S N E+TL    DV  +++ R ++F+ES
Sbjct: 271 KLTESGNTEETLLSVTDVVDSEDGRDEYFMES 302


>SB_34771| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 129

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = +1

Query: 154 MSANREDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYEN 285
           + +++ + +RQF   T  +E  +   L   +W+LDVA  ++++N
Sbjct: 4   LKSSQREKVRQFIAFTETNERTAITCLNQHDWRLDVASDNYFQN 47


>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3760

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 145 EITMSANREDTLRQFCDVTGADEDRSKFFLES 240
           ++T S N E+TL    DV  +++ R ++F+ES
Sbjct: 249 KLTESGNTEETLLSVTDVVDSEDGRDEYFMES 280


>SB_23539| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1041

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 499 AGGSERSGQQILGPSKGRKDIVSEMFKSVRERG 597
           A G+ RSG+++ GP  G++  + ++ + VR  G
Sbjct: 559 AAGARRSGRRLRGPDAGKRGPLGQIVRKVRRSG 591


>SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19)
          Length = 494

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -1

Query: 565 RRYLSCLYLALRSVARTVLSP--QHKMPDLLPHRLSFPAAAILWSQTLY 425
           R + S + + +   A    SP  QH++ D+LP     P AAI W   +Y
Sbjct: 53  RAFKSVVLIVIMLTAVIDYSPVYQHRVQDVLPKLNHTPLAAIYWYVNIY 101


>SB_57910| Best HMM Match : SAPS (HMM E-Value=2.8)
          Length = 406

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 481 LPHRLSFPAAAILWSQTLYLRFSFFL 404
           +PHR+S PA  +L S T  +R SFF+
Sbjct: 56  VPHRVSLPACHLLNSLTSTVRPSFFI 81


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,870,487
Number of Sequences: 59808
Number of extensions: 340633
Number of successful extensions: 916
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)