Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I19
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    27   0.95 
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    27   0.95 

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 26.6 bits (56), Expect = 0.95
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 96  LASLCRFHSLKFNDLFLVLVCQSKLSAVKYPV 1
           L  LC+  SL  +   LVLV   +  AVKYP+
Sbjct: 258 LFKLCQMFSLYLSTYVLVLVGVDRWVAVKYPM 289



 Score = 25.4 bits (53), Expect = 2.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 310 LEPHLHYHRSHRNLKEQHLIASL 242
           L PH+ +  SH NL E+  + SL
Sbjct: 513 LNPHIKFSNSHSNLPEEISLMSL 535


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 26.6 bits (56), Expect = 0.95
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 96  LASLCRFHSLKFNDLFLVLVCQSKLSAVKYPV 1
           L  LC+  SL  +   LVLV   +  AVKYP+
Sbjct: 259 LFKLCQMFSLYLSTYVLVLVGVDRWVAVKYPM 290



 Score = 25.4 bits (53), Expect = 2.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 310 LEPHLHYHRSHRNLKEQHLIASL 242
           L PH+ +  SH NL E+  + SL
Sbjct: 514 LNPHIKFSNSHSNLPEEISLMSL 536


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,336
Number of Sequences: 2352
Number of extensions: 12770
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)