Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I18
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    31   1.2  
11_06_0197 + 21149453-21149630,21149930-21149996,21150142-211502...    30   2.7  
04_03_0991 - 21500143-21500799,21500834-21501172                       30   2.7  
09_02_0596 - 11070744-11071137,11071270-11071459,11073261-110733...    29   6.3  
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     29   6.3  

>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 405 WHIYFWFMFTLFMHLFFYWNMTFFYFCDSTIY 310
           W  Y +F F  F   FF++   FF+F    +Y
Sbjct: 82  WEGYAFFFFFFFFFFFFFFFFFFFFFFSGDVY 113


>11_06_0197 +
           21149453-21149630,21149930-21149996,21150142-21150244,
           21150901-21150971,21151091-21151154,21151239-21151304,
           21151416-21151463,21151544-21151606,21151680-21151736,
           21151884-21151950,21151969-21152042,21152176-21152244,
           21152323-21152414,21152782-21152860,21153233-21153398,
           21153826-21153950,21154089-21154351,21154473-21154569,
           21154659-21154820,21154904-21155008,21155935-21156180
          Length = 753

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 151 EEGQSGFHLQITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTV 282
           E  Q+     +    EH  SI++ K +E  G   +R+KE  STV
Sbjct: 512 ELDQTTIRKMVMELREHARSIVEEKAREEAGNVLMRMKERFSTV 555


>04_03_0991 - 21500143-21500799,21500834-21501172
          Length = 331

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 541 QYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPP 672
           +Y +   +T V     F  LQ  +ID    TP PP  P  V PP
Sbjct: 116 EYLRDDCLTIVCDLTVFMELQTEDIDVDTATPPPPPPPTVVVPP 159


>09_02_0596 -
           11070744-11071137,11071270-11071459,11073261-11073387,
           11073559-11073821,11075779-11075797
          Length = 330

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 625 VGTPQPPAIPNQVSPPGTYPN 687
           V T   P +P Q+SPPG + N
Sbjct: 7   VSTDDSPTVPEQISPPGHWTN 27


>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 396 YFWFMFTLFMHLFFYWNMTFFYFCD 322
           +F+F F  F   FF++   FF+F D
Sbjct: 63  FFFFFFFFFFFFFFFFFFFFFFFFD 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,490,929
Number of Sequences: 37544
Number of extensions: 338230
Number of successful extensions: 975
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)