Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I16
(840 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 292 2e-79
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 292 2e-79
SB_56| Best HMM Match : Actin (HMM E-Value=0) 292 2e-79
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 292 2e-79
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 266 2e-71
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 8e-40
SB_54| Best HMM Match : Actin (HMM E-Value=0) 149 2e-36
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 131 8e-31
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 2e-28
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 112 4e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 95 8e-20
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 42 5e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 41 0.001
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 40 0.003
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 40 0.003
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 39 0.006
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.88
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.88
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.5
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 2.0
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 6.2
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 292 bits (717), Expect = 2e-79
Identities = 140/158 (88%), Positives = 144/158 (91%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GV+HT PIYEGYALPHA RDLTDYLM ILT
Sbjct: 159 GVTHTVPIYEGYALPHA-IIRLDLAGRDLTDYLMKILT 195
Score = 61.3 bits (142), Expect = 1e-09
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 132 KLPRLVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
++ LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE LCYVAL F QEM SSSS
Sbjct: 210 VRDIKEKLCYVALDFEQEMETAASSSS 236
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 292 bits (717), Expect = 2e-79
Identities = 140/158 (88%), Positives = 144/158 (91%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GV+HT PIYEGYALPHA RDLTDYLM ILT
Sbjct: 158 GVTHTVPIYEGYALPHA-ILRLDLAGRDLTDYLMKILT 194
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 35.9 bits (79), Expect = 0.041
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE L YVAL F QEMA +SSS
Sbjct: 209 VRDIKEKLAYVALDFEQEMATAAASSS 235
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 292 bits (717), Expect = 2e-79
Identities = 140/158 (88%), Positives = 144/158 (91%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GV+HT PIYEGYALPHA RDLTDYLM ILT
Sbjct: 158 GVTHTVPIYEGYALPHA-ILRLDLAGRDLTDYLMKILT 194
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE LCYVAL F QEM SSSS
Sbjct: 209 VRDIKEKLCYVALDFEQEMQTAASSSS 235
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 292 bits (717), Expect = 2e-79
Identities = 140/158 (88%), Positives = 144/158 (91%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GV+HT PIYEGYALPHA RDLTDYLM ILT
Sbjct: 159 GVTHTVPIYEGYALPHA-ILRLDLAGRDLTDYLMKILT 195
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE LCYVAL F QEM SSSS
Sbjct: 210 VRDIKEKLCYVALDFEQEMTTAASSSS 236
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 266 bits (652), Expect = 2e-71
Identities = 125/135 (92%), Positives = 129/135 (95%), Gaps = 2/135 (1%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 596 GVSHTXPIYE--GYA 634
GVSHT PIYE GY+
Sbjct: 159 GVSHTVPIYEERGYS 173
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +3
Query: 123 ATKKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
A + LV+DNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 2 ADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE LCYVAL F QEM SSSS
Sbjct: 183 VRDIKEKLCYVALDFEQEMQTAASSSS 209
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 161 bits (390), Expect = 8e-40
Identities = 74/146 (50%), Positives = 101/146 (69%), Gaps = 1/146 (0%)
Frame = +2
Query: 272 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 448
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 449 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPIYEG 628
PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEG 172
Query: 629 YALPHAHPASWT*PXRDLTDYLMXIL 706
+ALPH RD+T YL+ ++
Sbjct: 173 FALPHL-TRRLDIAGRDITKYLIKLM 197
Score = 35.9 bits (79), Expect = 0.041
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 233
+V DNG+G K G+AG + P +FPS G+
Sbjct: 9 IVCDNGTGFVKCGYAGSNFPAHIFPSMVGR 38
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 149 bits (362), Expect = 2e-36
Identities = 71/112 (63%), Positives = 85/112 (75%)
Frame = +2
Query: 374 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 553
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 554 ASGRTTGIVLDSGDGVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
ASGRTTG V D GDGVSHT P+Y+GY LPHA RDLT YL ++T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHA-TQRIDLAGRDLTHYLQRLVT 2239
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 233
+V+DNGSG CKAG + D++PR VFP+ G+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGR 2126
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 131 bits (316), Expect = 8e-31
Identities = 58/97 (59%), Positives = 79/97 (81%)
Frame = +2
Query: 422 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 601
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 602 SHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILTR 712
SH+ PIYEG+A+PH+ + RD++ YL +L +
Sbjct: 186 SHSVPIYEGFAMPHSIMRT-DIAGRDVSRYLRLLLRK 221
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 123 bits (296), Expect = 2e-28
Identities = 62/81 (76%), Positives = 67/81 (82%)
Frame = +2
Query: 467 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPIYEGYALPHA 646
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT PIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 647 HPASWT*PXRDLTDYLMXILT 709
RDLTDYLM ILT
Sbjct: 138 -IIRLDLAGRDLTDYLMKILT 157
Score = 100 bits (239), Expect = 2e-21
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 394
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LV+DNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE LCYVAL F QEM SSSS
Sbjct: 172 VRDIKEKLCYVALDFEQEMQTAASSSS 198
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 112 bits (269), Expect = 4e-25
Identities = 55/74 (74%), Positives = 60/74 (81%)
Frame = +2
Query: 488 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPIYEGYALPHAHPASWT* 667
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH PIYEGYALPHA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHA-ILRLDL 59
Query: 668 PXRDLTDYLMXILT 709
RDLTDYLM ++T
Sbjct: 60 AGRDLTDYLMKLMT 73
Score = 32.3 bits (70), Expect = 0.50
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEM 810
VRD KE LCYVAL F QE+
Sbjct: 88 VRDIKEKLCYVALDFYQEI 106
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 94.7 bits (225), Expect = 8e-20
Identities = 39/105 (37%), Positives = 68/105 (64%)
Frame = +2
Query: 332 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 511
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 512 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPIYEGYALPHA 646
PA ++ +VL+ +A+GR+ G+V+DSG + P+++GY L A
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQA 107
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +2
Query: 260 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 439
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 569 TGIVLDSGDGVSHTXPI 619
TG V+DSGDGV+H P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 233
LV+D GS M K GFAGDDAP+ VFP G+
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGR 1388
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 377 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 556
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 557 SGRTTGI----VLDSGDGVSHTXPIYEGYALP 640
+GI V D D + T Y LP
Sbjct: 572 YSAVSGIVEQRVTDGTDEIHSTDVNLAKYNLP 603
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +2
Query: 533 QAVLSLYASGRTTGIVLDSGDGVSHTXPIYEGYALPH 643
Q LSLYASG T G+ L SG + IYEG+ L H
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNH 803
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +3
Query: 93 TI*LKTNSRRATKKLPR-----LVVDNGSGMCKAGFAGDDAPRAVFPS 221
T+ +T RR + KL +V+DNG G+ K GFAGD PR + P+
Sbjct: 681 TVIPRTKKRRYSFKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPA 728
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 39.5 bits (88), Expect = 0.003
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Frame = +2
Query: 281 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 454
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE----------------- 315
Query: 455 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTXP 616
+ M +I+FE +N A+ A LS Y S +V+D+G +H P
Sbjct: 316 ---GLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVP 372
Query: 617 IYEGYALPHA 646
++ G + A
Sbjct: 373 VFNGKVIKKA 382
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 500 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTXPIYEGYAL 637
++ T A+ + S RT TG V+DSGDGV+H P+ EGY +
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVI 84
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -2
Query: 218 GEHGARSIISCETGLAHTGAIV 153
GE+G+ SI+S ETGLAHTGAI+
Sbjct: 9 GENGSGSIVSGETGLAHTGAII 30
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 323 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 475
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 217 GNTARGASSPAKPALHIPEPLSTT 146
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.88
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 464 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 580
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +1
Query: 451 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGI 630
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 631 RTPPRPS 651
+T +PS
Sbjct: 707 QTHSQPS 713
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 217 GNTARGASSPAKPALHIPEPLSTT 146
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.5
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -1
Query: 609 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 457
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 456 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 292
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 217 GNTARGASSPAKPALHIPEPLSTT 146
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 448 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 540
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 528 PSKPCSRCTRPVVPP 572
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 487 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIR 633
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 452 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 580
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 603 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 430
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 429 G 427
G
Sbjct: 147 G 147
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 217 GNTARGASSPAKPALHIPEPLSTT 146
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 217 GNTARGASSPAKPALHIPEPLSTT 146
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,920,435
Number of Sequences: 59808
Number of extensions: 554708
Number of successful extensions: 1831
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1818
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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