Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I16
(840 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 292 2e-79
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 290 9e-79
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 290 9e-79
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 287 8e-78
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 286 1e-77
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 286 1e-77
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 285 3e-77
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 285 3e-77
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 285 3e-77
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 260 6e-70
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 233 1e-61
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 229 2e-60
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 161 7e-40
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 127 8e-30
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 116 3e-26
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 86 3e-17
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 7e-12
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 66 3e-11
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 58 1e-08
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 44 1e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 44 1e-04
At3g05690.1 68416.m00636 CCAAT-binding transcription factor (CBF... 34 0.10
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.95
At1g32190.1 68414.m03959 expressed protein 30 2.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.8
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 29 5.1
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 29 5.1
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 29 5.1
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 8.9
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 8.9
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 8.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 292 bits (717), Expect = 2e-79
Identities = 141/158 (89%), Positives = 143/158 (90%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GVSHT PIYEGYALPHA RDLTDYLM ILT
Sbjct: 160 GVSHTVPIYEGYALPHA-ILRLDLAGRDLTDYLMKILT 196
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE L Y+AL + QEM +SSS
Sbjct: 211 VRDVKEKLAYIALDYEQEMETANTSSS 237
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 290 bits (711), Expect = 9e-79
Identities = 140/158 (88%), Positives = 142/158 (89%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GVSHT PIYEGYALPHA RDLTD+LM ILT
Sbjct: 160 GVSHTVPIYEGYALPHA-ILRLDLAGRDLTDHLMKILT 196
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE L Y+AL F QE+ +SSS
Sbjct: 211 VRDMKEKLSYIALDFEQELETSKTSSS 237
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 290 bits (711), Expect = 9e-79
Identities = 140/158 (88%), Positives = 142/158 (89%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GVSHT PIYEGYALPHA RDLTD+LM ILT
Sbjct: 160 GVSHTVPIYEGYALPHA-ILRLDLAGRDLTDHLMKILT 196
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE L Y+AL + QE+ +SSS
Sbjct: 211 VRDMKEKLSYIALDYEQELETSKTSSS 237
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 287 bits (703), Expect = 8e-78
Identities = 139/158 (87%), Positives = 141/158 (89%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GVSHT PIYEGYALPHA RDLTD LM ILT
Sbjct: 160 GVSHTVPIYEGYALPHA-ILRLDLAGRDLTDSLMKILT 196
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE L YVAL + QE+ SSSS
Sbjct: 211 VRDIKEKLAYVALDYEQELETAKSSSS 237
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 286 bits (701), Expect = 1e-77
Identities = 138/158 (87%), Positives = 140/158 (88%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GVSHT PIYEGYALPHA RDLTD LM ILT
Sbjct: 160 GVSHTVPIYEGYALPHA-ILRLDLAGRDLTDALMKILT 196
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 34.7 bits (76), Expect = 0.077
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE LCY+AL + QE+ +SSS
Sbjct: 211 VRDIKEKLCYIALDYEQELETAKTSSS 237
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 286 bits (701), Expect = 1e-77
Identities = 138/158 (87%), Positives = 140/158 (88%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GVSHT PIYEGYALPHA RDLTD LM ILT
Sbjct: 160 GVSHTVPIYEGYALPHA-ILRLDLAGRDLTDALMKILT 196
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 34.7 bits (76), Expect = 0.077
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE LCY+AL + QE+ +SSS
Sbjct: 211 VRDIKEKLCYIALDYEQELETAKTSSS 237
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 285 bits (699), Expect = 3e-77
Identities = 135/158 (85%), Positives = 142/158 (89%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GVSHT PIYEG++LPHA RDLTDYLM ILT
Sbjct: 160 GVSHTVPIYEGFSLPHA-ILRLDLAGRDLTDYLMKILT 196
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 233
+V DNG+GM KAGFAGDDAPRAVFPS G+
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGR 39
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE L +VA+ + QEM +SSS
Sbjct: 211 VRDIKEKLSFVAVDYEQEMETSKTSSS 237
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 285 bits (699), Expect = 3e-77
Identities = 135/158 (85%), Positives = 142/158 (89%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GVSHT PIYEG++LPHA RDLTDYLM ILT
Sbjct: 160 GVSHTVPIYEGFSLPHA-ILRLDLAGRDLTDYLMKILT 196
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 233
+V DNG+GM KAGFAGDDAPRAVFPS G+
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGR 39
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE L +VA+ + QEM +SSS
Sbjct: 211 VRDIKEKLSFVAVDYEQEMETSKTSSS 237
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 285 bits (699), Expect = 3e-77
Identities = 135/158 (85%), Positives = 142/158 (89%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXILT 709
GVSHT PIYEG++LPHA RDLTDYLM ILT
Sbjct: 160 GVSHTVPIYEGFSLPHA-ILRLDLAGRDLTDYLMKILT 196
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 233
+V DNG+GM KAGFAGDDAPRAVFPS G+
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGR 39
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSS 834
VRD KE L +VA+ + QEM +SSS
Sbjct: 211 VRDIKEKLSFVAVDYEQEMETSKTSSS 237
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 260 bits (638), Expect = 6e-70
Identities = 120/157 (76%), Positives = 136/157 (86%)
Frame = +2
Query: 236 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P R VMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+
Sbjct: 41 PRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLE 100
Query: 416 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 595
PEEHP+LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGD
Sbjct: 101 PEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGD 160
Query: 596 GVSHTXPIYEGYALPHAHPASWT*PXRDLTDYLMXIL 706
GVSHT PIYEGYALPHA RDLT+YL I+
Sbjct: 161 GVSHTVPIYEGYALPHA-ILRLDLAGRDLTEYLTKIM 196
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 233
+V DNG+GM KAGFAGDDAPRAVFPS G+
Sbjct: 11 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGR 40
Score = 34.7 bits (76), Expect = 0.077
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSSPD 840
VRD KE LCY+A+ + QEM +SS+ D
Sbjct: 212 VRDIKEKLCYIAVDYEQEMEKATTSSAID 240
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 233 bits (569), Expect = 1e-61
Identities = 108/151 (71%), Positives = 127/151 (84%)
Frame = +2
Query: 254 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 433
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 434 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTX 613
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 614 PIYEGYALPHAHPASWT*PXRDLTDYLMXIL 706
PIYEG ALPHA R LT+YLM I+
Sbjct: 121 PIYEGSALPHA-ILRLDLAGRHLTNYLMKIM 150
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEMAXXXSSSSPD 840
VRD KE Y+AL + QEM SS+ D
Sbjct: 163 VRDIKEQFGYIALDYEQEMEKATKSSAID 191
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 229 bits (560), Expect = 2e-60
Identities = 106/150 (70%), Positives = 123/150 (82%)
Frame = +2
Query: 260 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 439
G+ +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 440 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPI 619
TEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHT P+
Sbjct: 97 TEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPV 156
Query: 620 YEGYALPHAHPASWT*PXRDLTDYLMXILT 709
YEGYALPH RDLTDYL+ I+T
Sbjct: 157 YEGYALPHG-ILRLDLGGRDLTDYLIEIMT 185
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 233
+V D G GM +AGFAGD+AP+ VFP G+
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGR 33
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 754 VRDXKEXLCYVALXFXQEM 810
VRD KE LCYVAL + QEM
Sbjct: 200 VRDIKEKLCYVALDYEQEM 218
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 161 bits (390), Expect = 7e-40
Identities = 71/147 (48%), Positives = 97/147 (65%)
Frame = +2
Query: 272 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 451
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 452 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPIYEGY 631
LNP NREKM + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H P+ +GY
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGY 170
Query: 632 ALPHAHPASWT*PXRDLTDYLMXILTR 712
+ PH R +T YL+ +L+R
Sbjct: 171 SFPHL-TKRMNVAGRHITAYLVDLLSR 196
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 233
+V DNG+G K GFAG++ P +VFP G+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGR 36
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 127 bits (307), Expect = 8e-30
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 8/129 (6%)
Frame = +2
Query: 275 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 445
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 446 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHT 610
+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHV 186
Query: 611 XPIYEGYAL 637
P+ EGY +
Sbjct: 187 VPVAEGYVI 195
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 138 PRLVVDNGSGMCKAGFAGDDAPRAVFPS 221
P +V+DNG+G K GFAG+ P + P+
Sbjct: 7 PAIVIDNGTGYTKMGFAGNVEPCFILPT 34
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 116 bits (278), Expect = 3e-26
Identities = 52/123 (42%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +2
Query: 281 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 457
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 458 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPIYEGYAL 637
+ REK ++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVL 195
Query: 638 PHA 646
A
Sbjct: 196 QKA 198
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPS 221
+VVD GS CKAG+AG+DAP+AVFPS
Sbjct: 10 IVVDLGSHTCKAGYAGEDAPKAVFPS 35
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 85.8 bits (203), Expect = 3e-17
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Frame = +2
Query: 332 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 508
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 509 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPIYEGYALPH 643
Y + QAVLSLYA GR +G +D G G P+ EG A+ H
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEG-AVQH 160
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 68.1 bits (159), Expect = 7e-12
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 266 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 442
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 443 EAPLNPKANREK 478
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 248
+VVD GS CKAG+AG+DAP+AVFPS G +G
Sbjct: 10 IVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNG 44
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Frame = +2
Query: 323 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 502
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 503 FNTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTXPIYEGYALPHA 646
F ++Y+A Q+++ LY + R +V+D G +H P+ + L HA
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHA 178
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVFPS 221
+V+DNG G+ KAG G+ P V P+
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPN 30
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Frame = +2
Query: 332 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 508
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 509 TPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTXPIYEGYALPHAHPASWT*PX 673
PA+ + A S L+ + GIVL G +H+ P +G + + +
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPI-YKGSSRTNIGG 203
Query: 674 RDLTDYLMXILT 709
+TDYL +L+
Sbjct: 204 YHVTDYLKQLLS 215
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 144 LVVDNGSGMCKAGFAGDDAPRAVF 215
+V+DNG+ + G+AG+ PR VF
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVF 45
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Frame = +2
Query: 389 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 538
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 539 VLSLYASGRTTGIVLDSGDGVSHTXPIYEG 628
VL+LYA+ RT+GIV++ G V PI G
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Frame = +2
Query: 389 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 538
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 539 VLSLYASGRTTGIVLDSGDGVSHTXPIYEG 628
VL+LYA+ RT+GIV++ G V PI G
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHG 270
>At3g05690.1 68416.m00636 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 295
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 457 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRT 636
P + ED +V + Q+ +RR SRA A V + + R+ + H HL +R
Sbjct: 128 PLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRR 187
Query: 637 P 639
P
Sbjct: 188 P 188
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 445 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHR 573
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 492 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCW 584
C K S C P+ CS C +P P SCW
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCW 374
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 290 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 469
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 470 REK 478
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 290 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 469
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 470 REK 478
REK
Sbjct: 225 REK 227
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RRHPSRALAVRVRSYHRYRAGLRRR 597
RR PSR+L+ R RSY R R+ +RRR
Sbjct: 121 RRSPSRSLS-RSRSYSRSRSPVRRR 144
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RRHPSRALAVRVRSYHRYRAGLRRR 597
RR PSR+L+ R RSY R R+ +RRR
Sbjct: 132 RRSPSRSLS-RSRSYSRSRSPVRRR 155
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RRHPSRALAVRVRSYHRYRAGLRRR 597
RR PSR+L+ R RSY R R+ +RRR
Sbjct: 162 RRSPSRSLS-RSRSYSRSRSPVRRR 185
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -1
Query: 627 PS*MGXVWETPSPESSTIPVVRPDAYSESTAWMATY-MAGVLNVSNMIWVIFSLLALGLR 451
PS + V ++PS S +PVV S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 450 GASVSRT---GCSSGAT 409
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 378 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 289
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 370 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 263
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,047,584
Number of Sequences: 28952
Number of extensions: 360310
Number of successful extensions: 1071
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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