Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I15
         (817 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07)                 56   3e-08
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_16159| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_25676| Best HMM Match : TSP_1 (HMM E-Value=0.0055)                  29   4.5  
SB_52428| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.0  
SB_16289| Best HMM Match : Phage_integrase (HMM E-Value=0.4)           29   6.0  
SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2)                 29   6.0  

>SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07)
          Length = 203

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 23/55 (41%), Positives = 39/55 (70%)
 Frame = +1

Query: 154 WASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 318
           + +++D ELLPA+  WVFP  G+MQ++KQ+ ++A  D+   + +L+  LL +TFL
Sbjct: 75  YVNFADQELLPAAATWVFPTYGMMQYHKQSTDKAMEDVKKYMTMLNDVLLMKTFL 129


>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 509

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 394 SSTCWKACSSVXEDNDIGKCDSLGNQGRCV 305
           SS CWK+CS    D    +C     +G CV
Sbjct: 463 SSQCWKSCSGCCVDKKPVQCPLWAKEGECV 492


>SB_16159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 351

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 124 DLATQARVWQWASWSDSELLPASCA 198
           DL T A+V+ WA W   ++   SCA
Sbjct: 78  DLTTTAQVYSWAMWEPWQMRNLSCA 102


>SB_25676| Best HMM Match : TSP_1 (HMM E-Value=0.0055)
          Length = 141

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 124 DLATQARVWQWASWSDSELLPASCA 198
           DL T A+V+ WA W   ++   SCA
Sbjct: 78  DLTTTAQVYSWAMWEPWQMRNLSCA 102


>SB_52428| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 94

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 444 RSGTNAERLSATNGRSGLARAGKHAAVXLKTMTSAS 337
           +SG N  + SA + RS    AGK A + +KT+  A+
Sbjct: 24  KSGININKYSAHSTRSASMSAGKTANISIKTIMDAT 59


>SB_16289| Best HMM Match : Phage_integrase (HMM E-Value=0.4)
          Length = 158

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 444 RSGTNAERLSATNGRSGLARAGKHAAVXLKTMTSAS 337
           +SG N  + SA + RS    AGK A + +KT+  A+
Sbjct: 88  KSGININKYSAHSTRSASMSAGKTANISIKTIMDAA 123


>SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2)
          Length = 252

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 448 ATVRNQR*TFISDERTLGSSTCWKACSSVXEDNDIGKCDS 329
           AT  ++R   +S E T  SST   + SS  ++ND+ + D+
Sbjct: 14  ATTEDERLNEVSQEETTKSSTKLNSDSSAKDENDVNEGDT 53


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,503,179
Number of Sequences: 59808
Number of extensions: 449558
Number of successful extensions: 1126
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)