Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I15
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...    60   2e-09
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...    60   2e-09
Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...    53   2e-07
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr...    31   0.75 
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr...    31   0.75 
U53333-12|AAA96165.1|  387|Caenorhabditis elegans Nuclear hormon...    29   5.3  

>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 26/58 (44%), Positives = 40/58 (68%)
 Frame = +3

Query: 366 LLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELA 539
           LL AFQ+VLD + R S++NV RWF TV +QP V  V+G ++L ++   ++  K+ EL+
Sbjct: 121 LLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELS 178



 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 25/82 (30%), Positives = 44/82 (53%)
 Frame = +1

Query: 73  ESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 252
           E +A+ +   +  L     +  A   QW  +++  LLPA   +V P +    F+K+ VE+
Sbjct: 24  EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83

Query: 253 AKSDLLAALKVLDGHLLTRTFL 318
            K++L   L+VLD  L+ +T+L
Sbjct: 84  YKNELNGQLQVLDRVLVKKTYL 105


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 26/58 (44%), Positives = 40/58 (68%)
 Frame = +3

Query: 366 LLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELA 539
           LL AFQ+VLD + R S++NV RWF TV +QP V  V+G ++L ++   ++  K+ EL+
Sbjct: 146 LLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELS 203



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 33/101 (32%), Positives = 51/101 (50%)
 Frame = +1

Query: 16  FLAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASC 195
           F  G  PAFE   G  LL  + +I  ++   S         A   QW  +++  LLPA  
Sbjct: 40  FPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVL 89

Query: 196 AWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 318
            +V P +    F+K+ VE+ K++L   L+VLD  L+ +T+L
Sbjct: 90  GYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYL 130


>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 22/53 (41%), Positives = 36/53 (67%)
 Frame = +3

Query: 381 QHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELA 539
           Q+VLD + R S++NV RWF TV +QP V  V+G ++L ++   ++  K+ EL+
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELS 170



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +1

Query: 16  FLAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASC 195
           F  G  PAFE   G  LL  + +I  ++   S         A   QW  +++  LLPA  
Sbjct: 40  FPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVL 89

Query: 196 AWVFPYLGIMQFNKQNVERAKSDLLAALK-VLDGH 297
            +V P +    F+K+ VE+ K++L   L+ VLD +
Sbjct: 90  GYVLPSVSAANFDKKTVEQYKNELNGQLQYVLDAN 124


>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
           protein F25C8.3b protein.
          Length = 3175

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +3

Query: 384 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 536
           H L PS+ ++L +V RW L  A  P V    GSL L        P   Q++
Sbjct: 85  HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135


>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
           protein F25C8.3a protein.
          Length = 3184

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +3

Query: 384 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 536
           H L PS+ ++L +V RW L  A  P V    GSL L        P   Q++
Sbjct: 85  HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135


>U53333-12|AAA96165.1|  387|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 78 protein.
          Length = 387

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 160 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 279
           S+ ++ +L A C W   +  + + +K+NV + KS L+  L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,231,827
Number of Sequences: 27780
Number of extensions: 322095
Number of successful extensions: 867
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)