Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I14
(818 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015) 84 2e-16
SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07) 31 1.1
SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 30 2.6
SB_46699| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 30 2.6
SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19) 30 2.6
SB_7389| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 30 2.6
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_39363| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 29 4.5
SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 29 4.5
SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07) 29 4.5
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 29 4.5
SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 29 4.5
SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 29 4.5
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 29 4.5
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 29 4.5
SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14) 29 4.5
SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 29 4.5
SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13) 29 4.5
SB_4973| Best HMM Match : RVT_1 (HMM E-Value=8.6e-11) 29 4.5
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 29 6.0
SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21) 29 6.0
SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 29 6.0
SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05) 29 6.0
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 29 6.0
SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022) 29 6.0
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 29 6.0
SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 29 6.0
SB_46040| Best HMM Match : PTN_MK_N (HMM E-Value=5.4) 29 6.0
SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056) 29 6.0
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 29 6.0
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 29 6.0
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 29 6.0
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 29 6.0
SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 29 6.0
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 29 6.0
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 29 6.0
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 28 7.9
>SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015)
Length = 513
Score = 83.8 bits (198), Expect = 2e-16
Identities = 44/78 (56%), Positives = 58/78 (74%)
Frame = +1
Query: 355 ALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGEFAACQQLEEVRQVGSYKKGTM 534
ALLKR+T+L PS +QA V +LVTK+ +VLDN++V P A +EEVR VGS+KKGTM
Sbjct: 378 ALLKRNTKLTPSQQEQALVQNLVTKVTSVLDNLIVDPD--TAEFGVEEVRAVGSHKKGTM 435
Query: 535 MAGKNVADIVVIMKTLPT 588
+ G +AD+ VI+K LPT
Sbjct: 436 LLGHPIADLTVILKRLPT 453
>SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07)
Length = 303
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP LTRR
Sbjct: 82 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLTRR 124
>SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 1541
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +1
Query: 292 LLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGE 471
LL FPRC P+ LT + ++ C + Q + L +V + V + ++A
Sbjct: 628 LLENLKFPRCLKPPNFGTLTSTQVCNFSDACHNGIGQVSYLRMVNEKGEVHVSFLMAKSR 687
Query: 472 FAACQQL 492
A +Q+
Sbjct: 688 VAPLKQI 694
>SB_46699| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 517
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +1
Query: 292 LLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGE 471
LL FPRC P+ LT + ++ C + Q + L +V + V + ++A
Sbjct: 286 LLENLKFPRCLKPPNFGTLTSTQVCNFSDACHNGIGQVSYLRMVNEKGEVHVSFLMAKSR 345
Query: 472 FAACQQL 492
A +Q+
Sbjct: 346 VAPLKQI 352
>SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19)
Length = 922
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 385 PSPTDQAAVLSLVTKLQTVLD-NIVVAPGE-FAACQQLEEVRQVGSYKKGTMMAGKNVAD 558
PS Q + SLVTK++T D N++V G+ + LEEVR+ G K T +A + ++
Sbjct: 345 PSTGYQTKIASLVTKIKTANDVNVIVLWGDPTTSIAFLEEVRKQGVTGK-TWLAPEGWSE 403
Query: 559 IVVIMK 576
+ K
Sbjct: 404 ATSLFK 409
>SB_7389| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 308
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +1
Query: 292 LLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGE 471
LL FPRC P+ LT + ++ C + Q + L +V + V + ++A
Sbjct: 77 LLENLKFPRCLKPPNFGTLTSTQVCNFSDACHNGIGQVSYLRMVNEKGEVHVSFLMAKSR 136
Query: 472 FAACQQL 492
A +Q+
Sbjct: 137 VAPLKQI 143
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 497 KCGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
+C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 625 RCHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 668
>SB_39363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 524
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 574 KTLPTKEAVEGLSNKVNEEVNXLMKAEGXGAXVSRVSRARLHCHRDLRXRQXL 732
KTL TK+ G+ N V + + L K E +S ++ H + R+ L
Sbjct: 31 KTLTTKDVTSGVVNAVQQAIGGLTKTEYSATDISGINIGTTHFLNAILQRKNL 83
>SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 942
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 82 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 124
>SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 909
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 390 CHRMVVTRKQDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 432
>SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07)
Length = 1286
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 621 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 663
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 616 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 658
>SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 817
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 434 CHRMVVTRKQDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 476
>SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 795
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 471 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 513
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 254 CHRMVVTRKQDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 296
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 476 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 518
>SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 452
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 184 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 226
>SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14)
Length = 707
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 104 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 146
>SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1412
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 564 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 606
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 82 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 124
>SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 638 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 680
>SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 436
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 236 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 278
>SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13)
Length = 776
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 456 CHRMVVTRKQDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 498
>SB_4973| Best HMM Match : RVT_1 (HMM E-Value=8.6e-11)
Length = 296
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 28 CHRMVVTRKHDGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 70
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 612 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 654
>SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 471
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 305 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 347
>SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21)
Length = 1405
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 564 CHRMVITRKQNGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 606
>SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1441
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 603 CHRMVITRKQNGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 645
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 653 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 695
>SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05)
Length = 288
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 58 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 100
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 621 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 663
>SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 386 CHRMVITRKQNGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 428
>SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022)
Length = 1012
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP L RR
Sbjct: 336 CHRMVITRKQNGSPRRTVDLSPLN-KFCQRETFAMESPFHLARR 378
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 358 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 400
>SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1155
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 382 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 424
>SB_46040| Best HMM Match : PTN_MK_N (HMM E-Value=5.4)
Length = 248
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 348 HSGPSKEAHGAMSVTYRSSSCFEPRHETADSIGQ 449
H P K AHG + + +R SC E R ++ + Q
Sbjct: 63 HGKPVKSAHGDIGLHHREPSCSEIRGDSCEDDAQ 96
>SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056)
Length = 437
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 164 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 206
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 655 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 697
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 641 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 683
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 579 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 621
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 713 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 755
>SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1059
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 555 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 597
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 210 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 252
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 636 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 678
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 500 CGKLGPTRRGQ*WPGRTLLIS*SS*KLCQRKRLSRDSPIRLTRR 631
C ++ TR+ P RT+ +S + K CQR+ + +SP +L RR
Sbjct: 102 CHRMVVTRKHDGSPRRTVDLSPLN-KYCQRETYATESPFQLARR 144
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 280 PFDLLL-AEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTV 441
PF L++ AE R KPAP + H L P P + S+V K Q V
Sbjct: 417 PFALVMEAEREHARAKPAPVQDRNEAKITTEHVRLTPVPGIVVKIESMVDKPQFV 471
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,578,741
Number of Sequences: 59808
Number of extensions: 428664
Number of successful extensions: 1057
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2287608719
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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