Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I14
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93386-4|CAB07644.1|  370|Caenorhabditis elegans Hypothetical pr...    33   0.32 
AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical ...    28   7.0  
U41510-8|AAK39385.1|  493|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>Z93386-4|CAB07644.1|  370|Caenorhabditis elegans Hypothetical
           protein R11H6.5 protein.
          Length = 370

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 25/99 (25%), Positives = 42/99 (42%)
 Frame = +1

Query: 337 DSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGEFAACQQLEEVRQVGS 516
           D+V  + +L R   L PS   +  +     K+   L+       +      +  +  VGS
Sbjct: 38  DAVFEKEILDRAANLTPSVEIRKRINEYAKKVIVALEK--EKREKTLVDIGIATISHVGS 95

Query: 517 YKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEEV 633
           +   T     + +D+VV + TLP+ E V  L  KV E +
Sbjct: 96  FVTDTTTHSSDKSDVVVQLSTLPSYETVAELGRKVVENM 134


>AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical
           protein Y95B8A.7 protein.
          Length = 608

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 505 QVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEEVNXL 642
           +VG   KGT + G   A++V+    +PT   VE +     E    L
Sbjct: 331 RVGIIAKGTFIKGDRCAEVVLTCTPVPTSGLVEQIRRLFGESTTSL 376


>U41510-8|AAK39385.1|  493|Caenorhabditis elegans Hypothetical
           protein ZC449.5 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 441 IGQYCCGSRRICSLPATRRSAASWVLQEGDNDGREERC*YRSH 569
           +G  CC   + C L   RR   S      D+D  EE    +SH
Sbjct: 53  LGGCCCLENKNCLLTRARRHLKSTTPATDDDDSEEETTTVKSH 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,759,729
Number of Sequences: 27780
Number of extensions: 314925
Number of successful extensions: 768
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)