Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I14
         (818 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g04020.1 68415.m00369 GDSL-motif lipase/hydrolase family prot...    29   2.8  
At1g76240.1 68414.m08853 expressed protein contains Pfam profile...    29   3.7  
At4g25720.1 68417.m03702 glutamine cyclotransferase family prote...    29   4.9  
At3g56000.1 68416.m06222 glycosyl transferase family 2 protein s...    28   6.5  

>At2g04020.1 68415.m00369 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL6 (GI:15054390), EXL1
           (GI:15054382) [Arabidopsis thaliana]; contains Pfam
           profile PF00657: Lipase/Acylhydrolase with GDSL-like
           motif
          Length = 261

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +1

Query: 511 GSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEEVNXLMKAEGXGAXVSRVS 684
           G    G    GK +AD + I   LP   A  GLS+   + ++  M     G  + R++
Sbjct: 77  GGKATGRFSNGKTIADYIAIYYKLPLVPAYLGLSDDRKDTISTGMNYASAGCGIRRLT 134


>At1g76240.1 68414.m08853 expressed protein contains Pfam profile
           PF03087: Arabidopsis protein of unknown function
          Length = 308

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 23/82 (28%), Positives = 43/82 (52%)
 Frame = +1

Query: 403 AAVLSLVTKLQTVLDNIVVAPGEFAACQQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTL 582
           A+V+  V ++ TVL ++ +  G + + +  +    +G  K+      + + + +V +K +
Sbjct: 195 ASVIGDVIEV-TVLVSVALFNGVYLSLRATKTTPFIGFLKRSEKK--EKLDEGIVELKQV 251

Query: 583 PTKEAVEGLSNKVNEEVNXLMK 648
             K  + GLS K NEEV  LMK
Sbjct: 252 EEKSLI-GLSKKKNEEVKSLMK 272


>At4g25720.1 68417.m03702 glutamine cyclotransferase family protein
           contains Pfam profile: PF05096 glutamine
           cyclotransferase
          Length = 320

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 207 TRYPRPGRDGASTLQQTPSLDASSALRPFISRTRFS*M 320
           TR P   +   S +Q  P+  ++S+ R FISR RF+ M
Sbjct: 3   TRSPYKRQTKRSMIQSLPASSSASSRRRFISRKRFAMM 40


>At3g56000.1 68416.m06222 glycosyl transferase family 2 protein
           similar to beta-(1-3)-glucosyl transferase GB:AAC62210
           GI:3687658 from [Bradyrhizobium japonicum], cellulose
           synthase from Agrobacterium tumeficiens [gi:710492] and
           Agrobacterium radiobacter [gi:710493]; contains Pfam
           glycosyl transferase, group 2 family protein domain
           PF00535
          Length = 535

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
 Frame = -3

Query: 627 LVNLIGESLDSLFRWQSFHDDYDISNVLPGHHCPLLVGPNLPHF-------F*LLAGCKF 469
           +V L+G +   + +W+SF  D DI      +H  +L+   +P F         + A CK 
Sbjct: 61  IVKLLGRTPQKVLKWESFKSD-DIELAPSSNHPMVLI--QIPIFNEKEVCQLSIGAACKL 117

Query: 468 SWSHNNIVQYCLQFRDEAQNSCLI 397
           SW  + ++   L    E ++  L+
Sbjct: 118 SWPLDRMIIQVLDDSTEEESQKLV 141


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,808,140
Number of Sequences: 28952
Number of extensions: 294202
Number of successful extensions: 667
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)