Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I13
(843 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 30 2.0
06_03_1228 - 28563546-28563630,28563897-28564000,28564256-285647... 30 2.7
04_03_0217 - 12769956-12770252,12770340-12770490,12770572-127708... 29 3.5
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 29 4.6
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 29 6.1
07_01_1074 - 9599465-9599545,9599632-9599690,9600070-9600143,960... 29 6.1
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082... 29 6.1
04_04_0136 - 23034715-23034794,23034930-23035104 29 6.1
04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334 29 6.1
03_04_0148 - 17708737-17709027,17709270-17709518,17709713-177098... 28 8.1
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/119 (21%), Positives = 52/119 (43%)
Frame = +2
Query: 125 KVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQ 304
+V+ E + + +EQN Q Q+QE + K + P+ + + F+ ++
Sbjct: 1230 RVASVEEIETHNNATIEQNVGYQQLQEQESVEFKETEVLEPQGVIPSHNVSSSEEFNPQE 1289
Query: 305 GTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTYTAPDGQVITVEYTAD 481
T E G++ QA+E + ++ +N+A + + AP+ V+ E T D
Sbjct: 1290 TV-----TKEEPGSDTQAEESPVVIEDTEDVNNSAALSE----KIAPEEHVLATETTVD 1339
>06_03_1228 -
28563546-28563630,28563897-28564000,28564256-28564759,
28564854-28564932,28566053-28566130,28566227-28566268,
28566352-28566449,28566542-28566673,28566757-28566879
Length = 414
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Frame = +2
Query: 245 PKVQLETSTYIPIIRFDKEQGTDGSYKTSYETGNNIQAQEQGYLK---TVGDNQDN-TAL 412
P VQ TSTY+P++ ++ + + +QA +L VG++Q + T
Sbjct: 224 PAVQTNTSTYVPLLGGVRDHQAHFAQVNQGQFSPAVQANTSTHLPFSGGVGEHQIHFTPK 283
Query: 413 VQQGSYTYTAPDGQVITVEYTADEFGFRVSGDHIPTPP 526
V QG + P Q T + GFR H TPP
Sbjct: 284 VNQGQF---PPSVQTNTSAHVPYSGGFREHQVHF-TPP 317
>04_03_0217 -
12769956-12770252,12770340-12770490,12770572-12770803,
12770979-12771040,12771189-12771235,12771313-12771431,
12771513-12771671,12771745-12771925,12772010-12772361,
12772673-12772717,12772789-12772854,12772951-12773016,
12773107-12773178,12773283-12773357,12773437-12773508,
12774169-12774240,12774499-12774570,12776252-12776323,
12776400-12776471,12776811-12776997,12778343-12778457
Length = 861
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -3
Query: 514 DVVTGNSETELVSGVLDGNDLTIRGCVCIGSLLDQSSVVLVITDCLQITLLLSLNVVTSF 335
D+V G S L+S + N L +R C G D +V + + L + L LS N +T
Sbjct: 201 DIVNGISPLALISNLTSLNTLILRNCKIYG---DLGAVDFSMFEKLSL-LDLSFNNITGK 256
Query: 334 I*SFVASVGSL-FLIETDNGDVG 269
+ + ++G+L FL +N G
Sbjct: 257 VSQSILNLGNLQFLFLGNNNLAG 279
>03_05_0890 -
28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +3
Query: 144 NSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEAT 323
N KWK + + ++ K+ +S T + S+W+P P SP+ ++ P +
Sbjct: 518 NLKWKRSQEIKPVKFLSPLDTTDVKKEVESPTRERISSWKPFP-SPVPKPPKDPTPIKEE 576
Query: 324 KLHMKLVT 347
+ K T
Sbjct: 577 SPNKKTDT 584
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 116 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDF-RPKVQL 259
PQ + + +QQ++ Q +Q++ Y P Q+Y+Q + +P+ Q+
Sbjct: 238 PQTPTAEQYQQQLQYQQYYQQHYPGYNPYMQQYQQYGQYQQYTQPQTQI 286
>07_01_1074 -
9599465-9599545,9599632-9599690,9600070-9600143,
9600797-9600996,9601074-9601365,9601665-9602411,
9602653-9602696,9602714-9602827,9603590-9603838,
9603922-9603927
Length = 621
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 488 GFRVSGDHIPTPPPXIG*NSKRP*PYLRRHQG*PGTRRHR-SQSNPEAAR 634
G VS +PTPPP + S+ P P R+ P HR + S+P R
Sbjct: 141 GLSVSPRRMPTPPP-LPRKSQSPPPAQRKSPSPPPAEHHRLASSDPPKKR 189
>05_05_0201 +
23206859-23206998,23207858-23207936,23208121-23208219,
23208561-23208674,23208762-23208910,23209010-23209091,
23209170-23209255,23209520-23209750,23209830-23210727
Length = 625
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 153 WKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATK 326
W + +N T+ P+ + QN + S +N P P+SP + R + P+ ATK
Sbjct: 488 WAMPASVNSTNP-FQPATYQM--QNPPVASVAPTNTYPAPSSPYAAPPRQQVPSPATK 542
>04_04_0136 - 23034715-23034794,23034930-23035104
Length = 84
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 234 STGFACLYSCCW 199
+TGFAC YSCC+
Sbjct: 2 ATGFACAYSCCY 13
>04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334
Length = 554
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 159 TNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPV 269
T S L K S P +++++ MTS+ +W P+
Sbjct: 77 TTSELEKDSNAAKPCRSDMNREPTKMTSEATRSWCPI 113
>03_04_0148 -
17708737-17709027,17709270-17709518,17709713-17709851,
17710050-17710268,17710360-17710735,17711741-17711909
Length = 480
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 143 EQQVEDQLPLEQNFNNYQ-PQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQ 304
E QVE L++ + + P + R A FR +LE YIP+ DKE+
Sbjct: 99 EAQVETTNQLKRIVDCIEKPLSNKVRHALETPSFRRMKRLEARLYIPLYEEDKEE 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,353,715
Number of Sequences: 37544
Number of extensions: 435652
Number of successful extensions: 1366
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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