Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I09
(830 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 299 2e-81
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 69 6e-12
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 68 1e-11
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 66 3e-11
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 64 2e-10
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 56 4e-08
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 53 2e-07
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 53 3e-07
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 51 1e-06
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 51 1e-06
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 50 2e-06
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 50 3e-06
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 50 3e-06
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 49 4e-06
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 48 9e-06
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 48 9e-06
SB_2275| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 47 2e-05
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 47 2e-05
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 46 5e-05
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 43 3e-04
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 43 3e-04
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 42 5e-04
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 42 6e-04
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 41 0.001
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 40 0.002
SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 40 0.002
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 40 0.003
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 33 0.005
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 39 0.006
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 38 0.008
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.023
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.070
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 35 0.070
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 33 0.21
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 33 0.28
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 33 0.38
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 33 0.38
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 31 1.1
SB_1889| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69) 31 1.5
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 29 3.5
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 29 4.6
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 29 4.6
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_27469| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-08) 29 6.1
SB_4283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_9051| Best HMM Match : Y_phosphatase (HMM E-Value=0) 29 6.1
SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28) 28 8.1
SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11) 28 8.1
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 299 bits (733), Expect = 2e-81
Identities = 141/209 (67%), Positives = 175/209 (83%), Gaps = 1/209 (0%)
Frame = +1
Query: 133 KSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYG 312
++++K+ D+S+RSVFVGNIPYEA+ E+LK+IFSEVGPV+SF+LVFDRETGKPKGYG
Sbjct: 10 QAQQKQSSGAADRSLRSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYG 69
Query: 313 FCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE-NPYGDPVE 489
FCEYKDQETALSAMRNLNGYE+ GR+LRVD+A +EK++ E++++ + E +PYG PV
Sbjct: 70 FCEYKDQETALSAMRNLNGYELNGRALRVDSAASEKNKEEIKSMEMTARPEVSPYGQPVP 129
Query: 490 PEKAPEAISKAVATLPPEQMFELMKQMKLXIQNNPNEARNMLLQNPQLAYALLQAQVIMR 669
PE+APEAI++AVA+LPPEQMFELMKQMK+ IQNNP EAR MLLQNPQLAYALLQAQV+M+
Sbjct: 130 PEEAPEAITQAVASLPPEQMFELMKQMKVCIQNNPEEARQMLLQNPQLAYALLQAQVVMK 189
Query: 670 IVDPXPAVTXLHPXNPVPPXLXXGDNPPQ 756
IVDP A + LH N +P + G P Q
Sbjct: 190 IVDPVIAQSILHRPNEMPGAIQPGGAPLQ 218
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 68.5 bits (160), Expect = 6e-12
Identities = 30/94 (31%), Positives = 54/94 (57%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
++VG++ + T +K +F G V S +L++D ET + KGYGF ++++ E A AM +
Sbjct: 244 LYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQM 303
Query: 364 NGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 465
NG+E+ GR L++ TE+ + + + E
Sbjct: 304 NGFELAGRPLKI-GPVTERGDSSAYSFLDDEEYE 336
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 67.7 bits (158), Expect = 1e-11
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Frame = +1
Query: 169 KSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALS 348
K +++ ++ + + +K +F G V+ L + TGK KGYGF EY++Q++A
Sbjct: 196 KKYARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSAND 255
Query: 349 AMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISKAVA 528
A+ ++N +++GG+ LRV A T + M A+ P P + I
Sbjct: 256 AIASMNLFDLGGQFLRVGRAITPPTSSAMAAINTTPPGTLPAAAAIAAAAVSAKIQAEER 315
Query: 529 TLPPEQMFELMKQMKLXIQNN-PNEARNMLLQNPQLAYALLQAQVIMR-IVDPXPAVTXL 702
+PPE + + I + P A L+ P +A L A V+ + ++ P + +
Sbjct: 316 GIPPELAPITIPAVTTVITSMLPGSAG--LVAFPTVAVTSLAAGVMPQPLITGSPGLIPV 373
Query: 703 HPXNPV 720
P P+
Sbjct: 374 APATPI 379
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +1
Query: 175 MRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 354
M V+VG+I +E E ++ F GP+ L +D K KG+ F EY E A A+
Sbjct: 101 MCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLAL 160
Query: 355 RNLNGYEIGGRSLRV 399
+NG +GGR+++V
Sbjct: 161 EQMNGVLLGGRNIKV 175
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 66.1 bits (154), Expect = 3e-11
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Frame = +1
Query: 127 MDKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKG 306
M K + E+ K +V+V N + E++K+I +E G ++S K++ D E GK KG
Sbjct: 92 MSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKG 150
Query: 307 YGFCEYKDQETALSAMRNLNGYEIGGRSL-------RVDNAC-----TEKSRMEMQALMQ 450
+GF ++ E A A+ LNG EIGGR L R + A EK R E Q
Sbjct: 151 FGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQ 210
Query: 451 GPQVE-NPYGDPVEPEKAPEAIS 516
G + DP++ E+ E S
Sbjct: 211 GVNLYIKNLDDPIDDERLREEFS 233
Score = 44.4 bits (100), Expect = 1e-04
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Frame = +1
Query: 181 SVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKD--QETALSAM 354
S++VG++ + T L + FS G VLS ++ D T + GY + ++ + AL A+
Sbjct: 14 SLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAI 73
Query: 355 RNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY----GDPVEPEKAPEAISKA 522
++G + + + V ++K R+E Q + N Y GD ++ E+ E ++A
Sbjct: 74 ARVDGMLLNDKKVFVGRWMSKKERIEKMG-TQPKKFTNVYVKNFGDDMDDEQMKEICAEA 132
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/102 (25%), Positives = 53/102 (51%)
Frame = +1
Query: 121 IKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKP 300
+K + K+++E+ + + ++++ N+ E+L++ FS G + S K++ D + G
Sbjct: 194 VKAEIEKKRQERINRFQGV-NLYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNS 251
Query: 301 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 426
KG+GF + E A A+ +NG + + L V A + R
Sbjct: 252 KGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQRREER 293
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/93 (33%), Positives = 57/93 (61%)
Frame = +1
Query: 121 IKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKP 300
I D ++K + ++FV N+P++A +++++FS+ G V +LV +R GKP
Sbjct: 152 ITEDHLRDKFSKFPTSLDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNR-AGKP 210
Query: 301 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 399
KGYG+ EY+ + +A +A+ L+ E+ GR++ V
Sbjct: 211 KGYGYVEYEQESSASTAVLTLDKTEVKGRTISV 243
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/74 (37%), Positives = 50/74 (67%)
Frame = +1
Query: 178 RSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 357
RSVF+GN+P++ E L+++F+ G V S +L+ DR+TG KG+G+ ++ ++ + A++
Sbjct: 56 RSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALK 115
Query: 358 NLNGYEIGGRSLRV 399
+N E GR +RV
Sbjct: 116 -MNNAEFKGRKIRV 128
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +1
Query: 157 SIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQE 336
+++ S +F+G +P +++K++ S G + +F LV D TG KGY FCEY D
Sbjct: 666 TVVPDSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLG 725
Query: 337 TALSAMRNLNGYEIGGRSLRVDNA 408
A++ LNG ++G + L V A
Sbjct: 726 ITDVAIQGLNGMQLGDKKLIVQRA 749
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 58.4 bits (135), Expect = 7e-09
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 181 SVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 360
S+ V N+ Y+ T + L F + K++FDRE+G+ +G+GF +Y D ETA +
Sbjct: 290 SLIVRNLSYDTTTDSLGAAFEGCS---NAKVIFDRESGESRGFGFVDYDDVETAKKVLSE 346
Query: 361 LNGYEIGGRSLRVDNA 408
+ G E+ GR +R+D A
Sbjct: 347 MAGAEVDGRQVRLDFA 362
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/99 (27%), Positives = 55/99 (55%)
Frame = +1
Query: 130 DKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGY 309
D+ ++++ K SVF+GN+ ++A E L F E G + +++ + G+ +G+
Sbjct: 164 DEETPTPKKTVPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVI--TQEGRSRGF 221
Query: 310 GFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 426
G+ ++ +E A+ LNG + GR +R++ A ++ SR
Sbjct: 222 GYADFTSKEDYNKAL-ELNGEDCCGREIRINPANSKPSR 259
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSA---M 354
+FVGN+P+E T + D+ S G + LV TG KGYGF EY +E A+ A +
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 355 RNLNGYEIGGRSLRV 399
N IGGR LRV
Sbjct: 175 LNTASKYIGGRILRV 189
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 57.2 bits (132), Expect = 2e-08
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
+FV NI EA + + ++FS+ G + + + DR TG KGY EY+ + A SA+ L
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 364 NGYEIGGRSLRVDNAC----TEKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISKAVAT 531
NG E+ G+++ VD A ++KSR +QA+ P + +P++ + S V T
Sbjct: 355 NGAEMLGQNISVDWAFIRGPSKKSR-SLQAVTSLP-LSKRIANPLQITMNTTSASVPVMT 412
Query: 532 LPP 540
P
Sbjct: 413 TSP 415
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +1
Query: 250 GPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 426
G +++ LV D++TGK KG+ F Y+DQ + + A+ N NG ++GGR++RVD+ C+ R
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVDH-CSNYRR 60
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +1
Query: 181 SVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 360
++ + +P + E +K IF VG V S KL+ DR TG+ GY F Y + + A A+R
Sbjct: 28 NLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVRE 87
Query: 361 LNGYEIGGRSLRVDNA 408
+NG + ++L+V A
Sbjct: 88 MNGARLQNKTLKVSFA 103
Score = 36.7 bits (81), Expect = 0.023
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
+FV +P EAT L +FS G + + +L D KGYGF + E A A+ L
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLD------KGYGFVNMSNYEEACHAICCL 327
Query: 364 NGYEIGGRSLR 396
NG G+ R
Sbjct: 328 NGTPQHGKYSR 338
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 56.0 bits (129), Expect = 4e-08
Identities = 24/73 (32%), Positives = 45/73 (61%)
Frame = +1
Query: 181 SVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 360
++F+ ++P E T L F G V+S K+ D++T K +GF Y + +A +A+++
Sbjct: 278 NLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQH 337
Query: 361 LNGYEIGGRSLRV 399
+NG++IG + L+V
Sbjct: 338 MNGFQIGAKRLKV 350
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/71 (30%), Positives = 42/71 (59%)
Frame = +1
Query: 166 DKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 345
+K VF+G +P + ++L +F E G + F+L+ D +G KG+ FC + +++ A
Sbjct: 148 EKVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQ 207
Query: 346 SAMRNLNGYEI 378
+A++ L+ EI
Sbjct: 208 NAVKKLDNKEI 218
Score = 35.5 bits (78), Expect = 0.053
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVF--DRETGKPKGYGFCEYKDQETALSAMR 357
+FVG+IP + +++ + FS+V L +V+ + GK +G+ F EY+ + A A R
Sbjct: 235 LFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLSADQKGKNRGFAFLEYESHQAASLARR 294
Query: 358 NL 363
L
Sbjct: 295 RL 296
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/80 (30%), Positives = 47/80 (58%)
Frame = +1
Query: 187 FVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLN 366
++GN+ ++ L+D FS V+ +++ DRET +P+G+ F + ++ A+ L+
Sbjct: 233 YIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELD 291
Query: 367 GYEIGGRSLRVDNACTEKSR 426
G E GRS++V+ A + + R
Sbjct: 292 GQEFDGRSMKVNQARSREQR 311
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/51 (35%), Positives = 34/51 (66%)
Frame = +1
Query: 256 VLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 408
+LS K++ DRETG+P+G+GF + ++ A+ +G ++ GR ++V+ A
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKA 85
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +1
Query: 166 DKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETA 342
D + +FVG + YE T E LK+ FS+ G ++ + D TG+P+G+ F ++K Q A
Sbjct: 25 DDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEA 83
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +1
Query: 175 MRSVFVGNIPYEATGEKLKDIFSEV-GPVLSFKLVFDRETGKPKGYGFCEYKDQETALSA 351
++ +FVG + E + EK+++ F + PV + + + + + +G+ F + D E +
Sbjct: 102 VKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSF-DSEDTVDK 160
Query: 352 MRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 444
+ + I G + V A ++ + + AL
Sbjct: 161 ICETQFHNIEGNKVEVKRALPKEVQQQQAAL 191
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +1
Query: 166 DKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 345
++S VF+G IP + ++L + + G + F+L D TG KG+ FC + +Q +A
Sbjct: 149 EESGTEVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAY 208
Query: 346 SAMRNLNGYEI-GGRSLRVDNACTEKSRMEMQALMQG 453
A+ LN +I GR L + C KSR + ++G
Sbjct: 209 QAITTLNDKDIRPGRRLAI---C--KSRSNSRLFVKG 240
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/75 (30%), Positives = 45/75 (60%)
Frame = +1
Query: 172 SMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSA 351
S +V+VGN+PY T L +F G V+ ++ D+ET + +G F + D+++A +A
Sbjct: 8 SKSTVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNA 67
Query: 352 MRNLNGYEIGGRSLR 396
+ +N ++ GR+++
Sbjct: 68 VAAVNKKQMFGRTIK 82
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/74 (31%), Positives = 43/74 (58%)
Frame = +1
Query: 187 FVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLN 366
++GN+ Y + L++ F V+ K++ DRETG+P+G+GF + +E A+ +
Sbjct: 8 YIGNLSYSVDEQALEEKFHGCD-VVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFD 66
Query: 367 GYEIGGRSLRVDNA 408
G + GR ++V+ A
Sbjct: 67 GQDFDGRPMKVNQA 80
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 51.2 bits (117), Expect = 1e-06
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
+F G++ E T E L F++ L K+V D+++ K KGYGF +KD + AMR +
Sbjct: 219 IFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMREM 278
Query: 364 N 366
N
Sbjct: 279 N 279
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +1
Query: 124 KMDKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRET-GKP 300
K SK+ + ++ K+ ++FV N+PY T + K F E+GP+ +V D++ +
Sbjct: 4 KASPSKKASKTPVISKT--TIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRC 61
Query: 301 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 402
+G+G+ + +E AL A N+ I GR + +D
Sbjct: 62 RGFGYVTFALEEDALKAKDNIK--SIKGRPIHLD 93
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/81 (34%), Positives = 40/81 (49%)
Frame = +1
Query: 166 DKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 345
D +FVG IPYE+ + L+ F++ G + ++ DR T K KGYGF + A
Sbjct: 6 DTKFTKLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
Query: 346 SAMRNLNGYEIGGRSLRVDNA 408
A +N I GR V+ A
Sbjct: 66 LACKNKRPM-IEGRQANVNLA 85
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +1
Query: 121 IKMDKSKEKEEQSIMDKSMRSV-FVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGK 297
IK +++++ + K R + FVGN+P++ T EK+ D F G SF+L+ +
Sbjct: 54 IKTEETEDVITKEQDGKKQRYILFVGNLPFDLTTEKVLDHFRCAGS-SSFRLLTKKTDNS 112
Query: 298 PKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNAC 411
KG GF E D A+ NL+ +GGR + V+ C
Sbjct: 113 SKGCGFLEIDDSIGYTKAL-NLHHSYLGGRKINVEVTC 149
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/87 (26%), Positives = 50/87 (57%)
Frame = +1
Query: 181 SVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 360
+++VG + + + + ++F + GPV++ + DR T +GYGF E+ +E A A++
Sbjct: 14 TIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKV 73
Query: 361 LNGYEIGGRSLRVDNACTEKSRMEMQA 441
+N ++ G+ +RV+ A +++ A
Sbjct: 74 MNMIKVYGKPIRVNKASAHNKNLDVGA 100
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 181 SVFVGNIPYEATGEKLKDIFSEVGPVLSF-KLVFDRETGKPKGYGFCEYKDQETALSAMR 357
++F+GN+ E + L D FS G +L K++ D +TG KG+ F + + + +A+
Sbjct: 101 NLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIE 160
Query: 358 NLNGYEIGGRSLRVDNACTEKSRME 432
+NG + R + V A ++S+ E
Sbjct: 161 AMNGQYLCNRPITVSYAFKKESKGE 185
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +1
Query: 142 EKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCE 321
++ E +S ++ V IP + T + + +F V + + K+V + +G G+GF +
Sbjct: 35 QQPEPQEAQESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVD 94
Query: 322 YKDQETALSAMRNLNGYEIGGRSLRV 399
Y E A A+ LNG+ IG + L+V
Sbjct: 95 YNTTEDAQKAIDKLNGFTIGNKVLKV 120
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/101 (23%), Positives = 49/101 (48%)
Frame = +1
Query: 181 SVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 360
+++V NIP + + + F G +++ +L+ D+ TG PKG GF Y + A +A+ +
Sbjct: 134 NLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISS 193
Query: 361 LNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPYGDP 483
L+G G ++ + + + +++ P G P
Sbjct: 194 LSGTFFPGSTMGLQIRYADDNSAKVRPPNNVPNFGQQMGGP 234
Score = 41.5 bits (93), Expect = 8e-04
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = +1
Query: 181 SVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 360
+++V NI Y+A E + +F + G V +++D + + KG+ F QE A +A++
Sbjct: 276 TLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQT 335
Query: 361 LNGYEIGGRSLRVDNACTEKSRMEM 435
LNG+ + L+ T R +
Sbjct: 336 LNGFMYTNKPLQSSRIRTLNRRSRL 360
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
VFVG IP + ++L +F GP+ +L+ D G+ +GY F Y ++ A ++ L
Sbjct: 76 VFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKTL 134
Query: 364 NGYEI 378
N YEI
Sbjct: 135 NNYEI 139
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/91 (25%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Frame = +1
Query: 151 EQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLV--------FDRETGKPKG 306
+Q ++ V+ GN+P++ T ++LK +F ++ L+ + ++ + +G
Sbjct: 41 DQKMVFADPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRG 100
Query: 307 YGFCEYKDQETALSAMRNLNGYEIGGRSLRV 399
+GF + + E A +A+++LNG E+ GR+L++
Sbjct: 101 FGFVTFANPEDAQTAVKSLNGKEVQGRTLKI 131
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 48.0 bits (109), Expect = 9e-06
Identities = 20/59 (33%), Positives = 37/59 (62%)
Frame = +1
Query: 223 KLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 399
+L F G V+S K+ D++T K +GF Y + +A +A++++NG++IG + L+V
Sbjct: 277 RLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKV 335
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +1
Query: 178 RSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 357
R +VG + E + L F G + ++ D T K +G+GF E++ E +A+
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAID 64
Query: 358 NLNGYEIGGRSLRVDNA 408
N+N E+ GR++RV+ A
Sbjct: 65 NMNESELFGRTIRVNLA 81
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 48.0 bits (109), Expect = 9e-06
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +1
Query: 166 DKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 345
D + +VFV N+ Y+ +KLKD F G V+ +++ D E K KG G +++ A+
Sbjct: 181 DPAASTVFVTNLDYKVNWQKLKDTFKCAGHVIRAEIMEDDEK-KSKGMGTVQFETPMEAM 239
Query: 346 SAMRNLNGYEIGGRSLRV 399
+A+ L+G + R+LRV
Sbjct: 240 NAVNLLHGKMLMDRALRV 257
Score = 36.3 bits (80), Expect = 0.030
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 178 RSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPK 303
+ VFV NIP+E+ + LKD ++V ++F +F+ E G+ K
Sbjct: 93 KKVFVSNIPFESRWQNLKDHMNKVVGDVAFAEIFEDEKGRSK 134
>SB_2275| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +1
Query: 193 GNIPYEATGEKLKDIFSEVGPVLSF 267
GNIPYEA+ E+LK+IFSEVGPV+SF
Sbjct: 2 GNIPYEASEEQLKEIFSEVGPVISF 26
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 47.2 bits (107), Expect = 2e-05
Identities = 18/59 (30%), Positives = 38/59 (64%)
Frame = +1
Query: 187 FVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
++GN+ Y + L++ F + V+ +++ DRETG+P+G+GF + ++T + ++NL
Sbjct: 85 YIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLEAKKTRIKPLKNL 142
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
V+VGN+P + + L DIF + G + L R G P + F E++D A A++
Sbjct: 263 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPP--FAFVEFEDPRDAEDAVKGR 320
Query: 364 NGYEIGGRSLRVD 402
+G+E G +RV+
Sbjct: 321 DGHEFDGYRIRVE 333
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +1
Query: 172 SMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRE---TGKPKGYGFCEYKDQETA 342
S R +++GN+ + + I + G + F+ +F G+P+GY F E+K +E A
Sbjct: 385 SERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDA 444
Query: 343 LSAMRNLNGYEIGGRSLRVDNACTEKS 423
A+R LN + R+L VD A KS
Sbjct: 445 RKALRGLNKKIVLSRALVVDWAHHHKS 471
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/91 (26%), Positives = 47/91 (51%)
Frame = +1
Query: 124 KMDKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPK 303
K+ K K K ++ + + +++G+IP+ ++K F + G V +L +++ + K
Sbjct: 82 KVKKIKPKGDEDELSPGV--IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSK 139
Query: 304 GYGFCEYKDQETALSAMRNLNGYEIGGRSLR 396
GY F E+ E A A ++ Y + GR L+
Sbjct: 140 GYAFVEFACDEVAKIAADTMHNYMMFGRLLK 170
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/74 (25%), Positives = 42/74 (56%)
Frame = +1
Query: 178 RSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 357
R +++GN+ + + +++ F E G V ++ D+E+G+ +G+GF + + A+
Sbjct: 9 RKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIE 67
Query: 358 NLNGYEIGGRSLRV 399
+N +GGR++ V
Sbjct: 68 KMNQSSVGGRNITV 81
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
+FV + T E L+ IFS G +LS +++ D++TG+ Y F E++ E A +
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 364 NGYEIGGRSLRVD-NACTEKSRMEMQ 438
+ I R + VD + K +++M+
Sbjct: 182 DNVLIDDRRIHVDFSQSVSKIKLQMR 207
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 271 LVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 408
++ DRETG+P+G+GF + +E A+ +G ++ GR ++V+ A
Sbjct: 127 IITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEA 172
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 42.7 bits (96), Expect = 4e-04
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +1
Query: 271 LVFDRETGKPKGYGFCEYKDQETALSAMRNL-----NGYEIGGRSLRVDNAC-TEKSRME 432
+V+DRET + + +G+ ++D++ A AM+ + G EI GR+L ++ A E S
Sbjct: 7 VVYDRETRRSRNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRALNIEYAQEKESSAPR 66
Query: 433 MQALMQGPQVENPYGDPVEPEKAP 504
GP P G P+ AP
Sbjct: 67 RGGYGGGPPRGPPRGHPMRGRGAP 90
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 42.7 bits (96), Expect = 4e-04
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +1
Query: 142 EKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCE 321
E +++ + +FVG + E T E L++ F G + ++ D T K +G+G+
Sbjct: 2 ENRQENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVT 61
Query: 322 YKDQETALSAMRNL--NG-YEIGGRSLRVDNA 408
+ D + + +++ NG + I G+ + V A
Sbjct: 62 FADYKVTRNVLKDKVENGAHRIDGKEVEVKRA 93
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +1
Query: 211 ATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRS 390
A G+ K +F +G ++S +V++ + KP+GY F EY+ + +A ++ +G +I GR
Sbjct: 21 AYGDAFKTLF--IGRIIS--MVYNSKASKPRGYAFIEYEHERDMHAAYKHADGKKIDGRR 76
Query: 391 LRVD 402
+ VD
Sbjct: 77 IVVD 80
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/84 (28%), Positives = 44/84 (52%)
Frame = +1
Query: 175 MRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 354
++S++V N+P + +LK +F++ G + + + D YGF + +E+A+ A+
Sbjct: 1 VKSIYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRD--------YGFVYFAKRESAVQAI 52
Query: 355 RNLNGYEIGGRSLRVDNACTEKSR 426
+NG I G L V A + SR
Sbjct: 53 DGINGAYIDGCKLEVSLAIPQSSR 76
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = +1
Query: 169 KSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALS 348
+ +R +F+G + + T E LKD FS+ G ++ V + G+ +G+GF Y+ ++
Sbjct: 47 EKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVD--CVIMKRDGRSRGFGFVTYESSDSVNE 104
Query: 349 AMR 357
++
Sbjct: 105 VLK 107
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 175 MRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 354
M V++GNI A+ +++ F GP+ + + P G+ FC ++D+ A A+
Sbjct: 1 MSRVYIGNIGDNASKREIEREFETFGPLRDVWVARN-----PPGFAFCVFEDRRDAEDAV 55
Query: 355 RNLNGYEIGGRSLRVDNA 408
R L+G I G+ RV+ A
Sbjct: 56 RELDGRYICGQRARVELA 73
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 250 GPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNG 369
G +++ LV D++TGK KG+ F Y+DQ + + A+ N NG
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNG 42
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 145 KEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 324
KE+ ++ V N+ E L+++F +GP+ L D+ T + KG+ F +
Sbjct: 170 KEDDGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
Query: 325 KDQETALSAMRNLNGY 372
+E A A+ L+G+
Sbjct: 230 VHREDAARAIEVLSGF 245
>SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/95 (26%), Positives = 45/95 (47%)
Frame = +1
Query: 118 IIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGK 297
II+++ + K+ ++F+ N+ + E L +F + KLVF G+
Sbjct: 94 IIRIECASYKKGPLSETNFAETLFLKNLSNKVKEEDLIRLFLRFQQNGAPKLVFRLMKGR 153
Query: 298 PKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 402
KG F + D E A+ A +NGY + GR + ++
Sbjct: 154 MKGQAFVTFPDSEVAIKAHSLVNGYRLKGRPVIIE 188
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 115 TIIKMDKSKEKEEQ-SIMDKSMR--SVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDR 285
TI +K K+ + ++ K+M+ +P+ A + LK +FSE G VL L +
Sbjct: 64 TIASFNKIKQMTDDIKLVKKAMKLSQQLEEKLPFHADHDWLKKVFSEFGKVLYVSLPRFK 123
Query: 286 ETGKPKGYGFCEYKDQETALSAMRNLN 366
G+ KG+ F E++ ++ A ++ N
Sbjct: 124 HNGEIKGFAFIEFESKQQAEHVVQMFN 150
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +1
Query: 163 MDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETA 342
++K+ RSVFVG + E LKD F + G V S + + G + YGF +KD +
Sbjct: 75 IEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVR-IMRTFLGYSRNYGFVLFKDDGPS 133
Query: 343 LSAMRNLNGYEIGGRSLRV 399
++ + I G+++ V
Sbjct: 134 KEVLK--KSHVINGKTVDV 150
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 145 KEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 324
+E+Q + + R++FV N+ + + F G V ++ DRETGK KG G +
Sbjct: 311 EEKQGVRE---RTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKL 367
Query: 325 KDQET 339
+ T
Sbjct: 368 RHPGT 372
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +1
Query: 175 MRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 354
M V++G++ A+ ++++ F GP+ + + P G+ FC + D+ A A+
Sbjct: 31 MTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARN-----PPGFAFCIFDDRRDAEDAV 85
Query: 355 RNLNGYEIGGRSLRVDNA 408
R L+G I G+ +RV+ A
Sbjct: 86 RELDGRYICGQRVRVELA 103
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 33.5 bits (73), Expect(2) = 0.005
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 235 IFSEVGPVLSFKLVFDRETG-KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 408
+ EV + +++ +RE + +G+GF ++QE R +G+E GR L+V A
Sbjct: 60 LVKEVSLSILARVIMEREQPERSRGFGFVTLENQEDLEDVTRKFDGFEYEGRRLKVAEA 118
Score = 24.6 bits (51), Expect(2) = 0.005
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVG 252
V+ GN+P+ + L+ +F + G
Sbjct: 11 VYAGNLPFSLNDDSLRQLFEDSG 33
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
V++G + + T L ++F++ GPV ++ D E+GK + GF + + A +A +
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVHFWSSDVAEAANVGM 584
Query: 364 NGYEIGGR 387
NG +I G+
Sbjct: 585 NGCDILGK 592
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
++VGN+ A +L+ F + G + K+ R P G+ F EY+D A A+R L
Sbjct: 6 LYVGNLGRNADSSELERAFEKFGRLS--KVWVARN---PPGFAFVEYEDYRDAEEAVREL 60
Query: 364 NGYEIGGRSLRVD 402
+G + R++RV+
Sbjct: 61 DGANVCDRTIRVE 73
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +1
Query: 133 KSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYG 312
K E + + + + V +PY T ++K+ F+ G + ++ D T + +G+G
Sbjct: 100 KEPETKITKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFG 159
Query: 313 FCEYKDQETALSAMRNLNGYEIGGRSLRV 399
F +K E A + + + I GR V
Sbjct: 160 FVRFKKDEDAKNVLS--TSHRIQGRLCEV 186
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 136 SKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKG 306
SK+ + ++ + VFVGNI ++ +LKD F G V+ +++ DR + KG
Sbjct: 66 SKDISKYKVVSNKCK-VFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 307 YGFCEYKDQETALSAMRNLNGYEIGGRSLRV 399
+GFCEY D E +L A+R L+ ++G +SL V
Sbjct: 88 FGFCEYSDPEASLRAIRLLHNLQVGDKSLVV 118
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 36.7 bits (81), Expect = 0.023
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 226 LKDIFSEVGPVL----SFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSL 393
L DIFS P L ++V D K KG+GF + +E A A+ ++ IGG+ +
Sbjct: 525 LDDIFSYTVPDLFVAREVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQV 584
Query: 394 RVDNACTEKSRMEMQALM 447
+ + A + + + + L+
Sbjct: 585 KTNWAARKNNPTQTKPLV 602
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 181 SVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQE 336
+V+VGN+P + +L+ +FS+ G +L K+ D KGY F + ++
Sbjct: 616 TVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFINARGEK 661
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 35.9 bits (79), Expect = 0.040
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 178 RSVFVGNIPYEATGEKLKDIFSEVGPV--LSFKLVFDRETGKPKGYGFCEYKDQ 333
+ +F+G + E + E +K + + P L K+V DRET K KGY F + ++
Sbjct: 104 KKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNE 157
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 35.1 bits (77), Expect = 0.070
Identities = 20/79 (25%), Positives = 43/79 (54%)
Frame = +1
Query: 166 DKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 345
D + R V N P LKD+FS G ++ ++ K + +G+ ++ +++A
Sbjct: 335 DVASRLFIVCN-PAPPPDHVLKDVFSRFGNLIDVWMM------KERNFGYAKFAAKQSAD 387
Query: 346 SAMRNLNGYEIGGRSLRVD 402
+A++ L+G+++ G L++D
Sbjct: 388 AAIQGLHGHDVLGMKLKID 406
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 214 TGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYE 375
T E++ +F + + L + TG+ KG+ + Y +A+ A LNG+E
Sbjct: 214 TQEQVVRLFDIIPGMQVCDLKRNYNTGESKGFAYVTYNSVGSAIYAKEKLNGFE 267
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 35.1 bits (77), Expect = 0.070
Identities = 19/81 (23%), Positives = 42/81 (51%)
Frame = +1
Query: 112 HTIIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRET 291
H+I ++ KE+ +Q R++++ + + L+ +F G + ++ +T
Sbjct: 48 HSIQELLSHKEEHDQ-------RTIYIRDFRPDIRKSSLESVFGPYGAIEDLSII-RTQT 99
Query: 292 GKPKGYGFCEYKDQETALSAM 354
GK KG+G+ Y++ E+A A+
Sbjct: 100 GKSKGFGYVTYENAESAQRAL 120
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 301 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLR 396
+ Y F YK AL+AMRNLNG + LR
Sbjct: 85 RSYSFVSYKSHNNALNAMRNLNGKALDEFGLR 116
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +1
Query: 142 EKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCE 321
+ ++++S R++FVG++ + + FS +G + +GK KG+ F
Sbjct: 30 QSPSMDLLEQSRRTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVR 89
Query: 322 YKDQETALSAM 354
+ +E S +
Sbjct: 90 LRKKEAVESVL 100
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +1
Query: 112 HTIIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRET 291
H I D S EK++ + R V + NIP ++ + FS G + S + + +T
Sbjct: 105 HVIDNSDVSMEKQD------TYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKT 158
Query: 292 GKPKGYGFCEYKDQETALSAMR----NLNGYEI 378
+ KG+ + A ++ +++GY+I
Sbjct: 159 KERKGHCIVTFASVTEAFEVVKKRKHHIHGYDI 191
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 283 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 402
R+ +GYGF E+ D A A+ +LNG ++ G + V+
Sbjct: 716 RDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVE 755
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 241 SEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 399
S GP+ + ++ D+ TG+ + +GF E+ + A L+G + R++ V
Sbjct: 478 SNAGPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASELLDGIRLYDRAINV 530
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 208 EATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGR 387
+A+ E L+ F + G + ++ D T + +G+GF +KD + A+ + N E+ G+
Sbjct: 118 QASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPK-AVDVVLNSGAQELDGK 176
Query: 388 SL 393
+
Sbjct: 177 KM 178
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 157 SIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPK 303
S+ D + +FVG +P + L+ IF G + ++ D+ TG+ K
Sbjct: 163 SVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
>SB_1889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 28
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 250 GPVLSFKLVFDRETGKPKGYGFCEYKDQ 333
G V +LV +R GKPKGYG+ EY+ +
Sbjct: 2 GVVKQVRLVTNR-AGKPKGYGYVEYEQE 28
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
+FVG + E L+++F G +L L YGF EY+D A AMR
Sbjct: 8 LFVGRLSKETKLRDLENVFYLYGKLLRCDL--------KTAYGFIEYEDPRDAEEAMRRE 59
Query: 364 NGYEIGGRSLRVD 402
N ++ G + V+
Sbjct: 60 NNRKLFGSRIVVE 72
>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
Length = 166
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 256 VLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRS 390
++S + V D ++G+ K YGF +KD+E AM N + G +S
Sbjct: 88 LMSKENVKDLKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQKS 132
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 190 VGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNG 369
VG E ++ +FS+ G +++ +++ +GY F E+ + A+ A++ NG
Sbjct: 82 VGPERVEKLKNVIRKVFSKFGQIVTEHYPMEKDL--TRGYIFLEFSNASDAVRAVKTANG 139
Query: 370 YEI 378
Y++
Sbjct: 140 YKL 142
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +1
Query: 184 VFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 363
+FVGN+ + E++K++F + G V VF K KG+GF + A +A L
Sbjct: 55 LFVGNL-IDCDEEEMKEMFKKYGEVAE---VF---INKEKGFGFIRLDTRLHAEAAKAGL 107
Query: 364 NGYEIGGRSLRV 399
+ GR+LRV
Sbjct: 108 DMATRKGRTLRV 119
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 178 RSVFVGNIPYEATGEKLKDIFSEVGPVLSFK 270
R+VFVGN+P + LK FS+ G V S +
Sbjct: 21 RTVFVGNLPLTLKKKALKKYFSKYGEVESVR 51
>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 274 VFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 408
++ G KG Y+D TA +A+ NG + G+S++V+ A
Sbjct: 209 IYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFMGQSIKVELA 253
>SB_57323| Best HMM Match : ShTK (HMM E-Value=0)
Length = 911
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 685 PAVTXLHPXNPVPPXLXXGDNPPQRFXYXXXSPPXHPXXXXXPDRPXP 828
P T + P PVPP D+P PP P PD P P
Sbjct: 677 PPQTTVSPGTPVPPT----DDPDCTTETPDTQPPTQPPVTQPPDTPVP 720
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 115 TIIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFD 282
T + + E + I D + F+GN+PY+ E + + FS V + K+ D
Sbjct: 256 TAPRSSRPTEVDLSKIPDNPPFTAFLGNLPYDVEREDILEFFSSVKSLRGRKVRVD 311
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +1
Query: 163 MDKSMRSVFVGNIPYEATGEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETA 342
M +S R V+ G +P + L+ G V RE GYGF E+ D A
Sbjct: 1 MSRSTR-VYFGRLPRDCRERDLEKFVRGYGRV--------REISMKLGYGFVEFDDYRDA 51
Query: 343 LSAMRNLNGYEIGG 384
+ +LNG + G
Sbjct: 52 DDCVYDLNGRNLLG 65
>SB_27469| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-08)
Length = 341
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -2
Query: 466 FLPEVLALELAFPFAISLYKHYLLLTNDHQFRIH*DFSWHSKPFPGLYIHKTHNLWVYRF 287
FL ++L L F ++++ H +L+ N ++ F+W P LYI+ N+ VY F
Sbjct: 199 FLMTFVSL-LCFLPSVAIASHEILMNNGDDNKLDIHFAW-----PILYINSFINVLVYSF 252
Query: 286 R 284
R
Sbjct: 253 R 253
>SB_4283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 415 EKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISKAV 525
EK+ ME G ++NP G+PV K E+ K +
Sbjct: 15 EKTHMESGIHALGSGIQNPIGEPVMGRKKAESTKKKI 51
>SB_9051| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 1831
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +1
Query: 388 SLRVDNACTEKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISKAVATLPPEQMFELMKQ 567
S+ +D E++ AL Q Q +PY + ++P++ E ++A +P E+ + +
Sbjct: 984 SVDLDAPQAEENEASFIALEQSAQNSSPYPEHIDPQETQETSAQA-TEVPIEEFLDYFNR 1042
Query: 568 MK 573
K
Sbjct: 1043 AK 1044
>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
Length = 1643
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 280 DRETGKPKGYGFCEYKDQET 339
D+ETGK KG C + DQET
Sbjct: 1138 DQETGKTKGEKECLFPDQET 1157
>SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11)
Length = 396
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 313 FCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 426
F E+ E+A+ A+ +LNG GGR+++ + +K R
Sbjct: 351 FVEFTRMESAIKAVVDLNGRYFGGRTVKANFFNLDKFR 388
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,200,090
Number of Sequences: 59808
Number of extensions: 466727
Number of successful extensions: 1541
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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