Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I08
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    24   4.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   8.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   8.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.5  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 309 KKLKASITDPRXEGRYPVRVEEHAQSPYRVQGQAVLTVDVPKDYDSDGTLDS 464
           KK+ AS+ + + EG   V+  + A+   + +G+A        D D D   D+
Sbjct: 337 KKVAASVKETQ-EGEKKVKDAQEAEERKKAEGEAAAEEAAKDDEDEDDEDDA 387


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +3

Query: 636 LPGQQNLARPFPPPPASEINGVLGPGPAHQVGLLGPFDTPXG 761
           LP  Q    P PPPP       +GP P+   G  GP   P G
Sbjct: 576 LPNAQPPPAPPPPPP-------MGPPPSPLAG--GPLGGPAG 608



 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +3

Query: 138 TAGSGSEWREIPVPRXNSLQRLCV*TQKLNSLTAAVTMSDP 260
           T+     W ++PV   + ++   + T  L+++ AA T   P
Sbjct: 729 TSSRNEPWNDLPVETSSPVREPALPTYALSTIVAAETAGVP 769


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 660 RPFPPPPASE-INGVLG-PGPAHQVGLLGP 743
           R +P  P  +   G+ G PGP  + GLLGP
Sbjct: 612 RGYPGMPGEDGTPGLRGEPGPKGEPGLLGP 641


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 643 PGNSMGRSSSTSLKYSD*YEFTLLLCLR 560
           PGN +GRSS  +L     +E+  ++ ++
Sbjct: 514 PGNDIGRSSYGALHVKQAFEYAYIVLVQ 541


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 879,540
Number of Sequences: 2352
Number of extensions: 18384
Number of successful extensions: 51
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)