Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I08
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical pr... 31 0.98
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr... 31 0.98
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 31 1.3
Z47808-4|CAA87772.1| 235|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 30 2.3
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 30 2.3
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 30 2.3
Z54342-16|CAA91156.1| 755|Caenorhabditis elegans Hypothetical p... 29 4.0
Z47072-4|CAA87370.1| 755|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 5.2
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d... 29 5.2
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 5.2
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase... 29 5.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 6.9
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 28 9.1
U29380-8|AAP68925.1| 334|Caenorhabditis elegans Mediator protei... 28 9.1
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 9.1
AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen pro... 28 9.1
>L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical
protein ZK1236.3b protein.
Length = 810
Score = 31.1 bits (67), Expect = 0.98
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = +3
Query: 606 NEVED-ERPMLLPGQQNLARPFPP------PPASEINGVLGPGPAHQVGLLGPFDTPXGF 764
NE+E +R +LP Q P PP PP + G+L P Q G+ F F
Sbjct: 436 NEIEKIDREQILPQQYMNMPPMPPQGQQRLPPPAYPPGILPPQQNRQQGVPPQFQRSPQF 495
Query: 765 XVGPKTXR 788
+GP R
Sbjct: 496 MIGPDGQR 503
>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
protein ZK1236.3a protein.
Length = 1000
Score = 31.1 bits (67), Expect = 0.98
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = +3
Query: 606 NEVED-ERPMLLPGQQNLARPFPP------PPASEINGVLGPGPAHQVGLLGPFDTPXGF 764
NE+E +R +LP Q P PP PP + G+L P Q G+ F F
Sbjct: 626 NEIEKIDREQILPQQYMNMPPMPPQGQQRLPPPAYPPGILPPQQNRQQGVPPQFQRSPQF 685
Query: 765 XVGPKTXR 788
+GP R
Sbjct: 686 MIGPDGQR 693
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 627 PMLLPGQQNLARPFPPPPASEI--NGVLGP-GPAHQVGLLGPFDTPXG 761
P PG + P PP +E +G+ GP GP + G+ GP TP G
Sbjct: 218 PAGYPGPRGAPGPVGPPGVAEEGPDGLPGPAGPPGKPGMPGPMGTPGG 265
>Z47808-4|CAA87772.1| 235|Caenorhabditis elegans Hypothetical
protein D2013.6 protein.
Length = 235
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 639 PGQQNLARPF---PPPPASEINGVLGPGPAHQVGLLGPFDTPXGFXVG 773
P Q N +R F PPP I GP P ++ + G F+ P + G
Sbjct: 178 PDQPNPSRVFMSSAPPPYPGIGPERGPHPTEELHVAGQFEAPPAYGSG 225
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Frame = +3
Query: 474 CKCVD-----TPDCNPRPGS------ARACGSGKYLCCYKRKQSNKVNSYQSEYFNEVED 620
C+C D +PD + RPG C +GK+ C + Y + + D
Sbjct: 1405 CRCRDDFVDESPDSSRRPGRICRPALVDECRTGKHDCHVNAICQDLPQGYTCQCSADFVD 1464
Query: 621 ERPMLL--PGQQNLARPFPPPPASEING 698
P PG+ RP PPPP ++G
Sbjct: 1465 VSPHRASHPGRLCQPRPTPPPPECRLDG 1492
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Frame = +3
Query: 474 CKCVD-----TPDCNPRPGS------ARACGSGKYLCCYKRKQSNKVNSYQSEYFNEVED 620
C+C D +PD + RPG C +GK+ C + Y + + D
Sbjct: 1989 CRCRDDFVDESPDSSRRPGRICRPALVDECRTGKHDCHVNAICQDLPQGYTCQCSADFVD 2048
Query: 621 ERPMLL--PGQQNLARPFPPPPASEING 698
P PG+ RP PPPP ++G
Sbjct: 2049 VSPHRASHPGRLCQPRPTPPPPECRLDG 2076
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Frame = +3
Query: 474 CKCVD-----TPDCNPRPGS------ARACGSGKYLCCYKRKQSNKVNSYQSEYFNEVED 620
C+C D +PD + RPG C +GK+ C + Y + + D
Sbjct: 1405 CRCRDDFVDESPDSSRRPGRICRPALVDECRTGKHDCHVNAICQDLPQGYTCQCSADFVD 1464
Query: 621 ERPMLL--PGQQNLARPFPPPPASEING 698
P PG+ RP PPPP ++G
Sbjct: 1465 VSPHRASHPGRLCQPRPTPPPPECRLDG 1492
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Frame = +3
Query: 474 CKCVD-----TPDCNPRPGS------ARACGSGKYLCCYKRKQSNKVNSYQSEYFNEVED 620
C+C D +PD + RPG C +GK+ C + Y + + D
Sbjct: 1989 CRCRDDFVDESPDSSRRPGRICRPALVDECRTGKHDCHVNAICQDLPQGYTCQCSADFVD 2048
Query: 621 ERPMLL--PGQQNLARPFPPPPASEING 698
P PG+ RP PPPP ++G
Sbjct: 2049 VSPHRASHPGRLCQPRPTPPPPECRLDG 2076
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Frame = +3
Query: 474 CKCVD-----TPDCNPRPGS------ARACGSGKYLCCYKRKQSNKVNSYQSEYFNEVED 620
C+C D +PD + RPG C +GK+ C + Y + + D
Sbjct: 1989 CRCRDDFVDESPDSSRRPGRICRPALVDECRTGKHDCHVNAICQDLPQGYTCQCSADFVD 2048
Query: 621 ERPMLL--PGQQNLARPFPPPPASEING 698
P PG+ RP PPPP ++G
Sbjct: 2049 VSPHRASHPGRLCQPRPTPPPPECRLDG 2076
>Z54342-16|CAA91156.1| 755|Caenorhabditis elegans Hypothetical
protein F26C11.1 protein.
Length = 755
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 147 YQQ*PQYNKHIFNDSQRNY 91
YQQ P YN+ ++N++QR Y
Sbjct: 545 YQQLPWYNEDLYNEAQRTY 563
>Z47072-4|CAA87370.1| 755|Caenorhabditis elegans Hypothetical
protein F26C11.1 protein.
Length = 755
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 147 YQQ*PQYNKHIFNDSQRNY 91
YQQ P YN+ ++N++QR Y
Sbjct: 545 YQQLPWYNEDLYNEAQRTY 563
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 663 PFPPPPASEINGVLGPGPAHQVGLLGPFDTP 755
P PP P G GPGPA G GP P
Sbjct: 180 PGPPGPDGAPGGGSGPGPAGPAGPPGPDGNP 210
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 663 PFPPPPASEINGVLGPGPAHQVGLLGPFDTP 755
P PP P G GPGPA G GP P
Sbjct: 180 PGPPGPDGAPGGGSGPGPAGPAGPPGPDGNP 210
>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
protein 1 protein.
Length = 1427
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = +3
Query: 435 DYDSDGTLDSLQYCKCVDTPDCNPRPGSARACGSGKYLCCYKRKQSNKVNSY 590
D D D +QYC CV PG+ G Y+ Y +Q + Y
Sbjct: 98 DSDDSSDDDEIQYCDCVAAALQQSLPGTPGRKGIIPYMSIYDTQQQARRRGY 149
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 654 LARPFPPPPASEINGVLGPGPAHQVGLL-GPFDTPXGFXVGPKTXRKR 794
+ RPF EI P PAHQ+G L G TP G P +R
Sbjct: 17 VTRPFVRQSHPEIAAWPAPPPAHQLGCLSGNVRTPVGGPAPPSPVLRR 64
>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
protein.
Length = 1427
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = +3
Query: 435 DYDSDGTLDSLQYCKCVDTPDCNPRPGSARACGSGKYLCCYKRKQSNKVNSY 590
D D D +QYC CV PG+ G Y+ Y +Q + Y
Sbjct: 98 DSDDSSDDDEIQYCDCVAAALQQSLPGTPGRKGIIPYMSIYDTQQQARRRGY 149
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 639 PGQQNLA-RPFPPPPASEINGVLGPGPAHQVGLLGP 743
P QNL+ P PPPP + G P P GL+GP
Sbjct: 567 PLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 639 PGQQNLARPFPPPPASEINGVLG---PGPAHQVGLLGP 743
PG LA P S + G++G PGP GL+GP
Sbjct: 232 PGNHGLAGQPGSPGQSVLGGIVGFAAPGPMGPPGLMGP 269
>U29380-8|AAP68925.1| 334|Caenorhabditis elegans Mediator protein 4
protein.
Length = 334
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 606 NEVEDERPMLLPGQQNLARP-FPPPPASEINGVLGPGPAHQVG 731
++V+ P LLPG+ RP P AS NG G P VG
Sbjct: 174 SKVQSTGPQLLPGKNVAQRPLITSPSASSSNG--GTAPIRTVG 214
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 486 DTPDCNPRPGSARACGSGKYLCCYKRKQSNKVNSYQSEYFNEVEDERPMLLPGQQNL 656
D PD G A G G+Y Y+R + +N+ + NE ER ++L +++L
Sbjct: 161 DDPDDPMNDGKKVAGGCGRYQPSYRRVGID-INAEWKKNVNEDTQERKIMLTAERDL 216
>AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen
protein 46 protein.
Length = 302
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 639 PGQQNLARPFPPPPASEI--NGVLG-PGPAHQVGLLGP 743
PG +PF P PA I G G PGP+ G+ GP
Sbjct: 203 PGADATPKPFIPGPAGPIGEEGEFGPPGPSGMPGIDGP 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,153,927
Number of Sequences: 27780
Number of extensions: 439557
Number of successful extensions: 1507
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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