Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I08
         (812 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   0.63 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   0.63 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   0.63 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    24   1.5  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   2.5  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    23   4.4  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   5.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 360 VRVEEHAQSPYRVQGQAVLTVDVP 431
           VR +E   +PYR +  AV+  D+P
Sbjct: 111 VRTKEEPHAPYRYEAVAVIHKDLP 134


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 360 VRVEEHAQSPYRVQGQAVLTVDVP 431
           VR +E   +PYR +  AV+  D+P
Sbjct: 111 VRTKEEPHAPYRYEAVAVIHKDLP 134


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 360 VRVEEHAQSPYRVQGQAVLTVDVP 431
           VR +E   +PYR +  AV+  D+P
Sbjct: 111 VRTKEEPHAPYRYEAVAVIHKDLP 134


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -3

Query: 573 CSAYACNNTGTFQSHMLSHCQV--LGCSQECQHICSTAENQEFHLNR 439
           CS Y+C N     SH+ SH  V    C+  C +      + + HL +
Sbjct: 22  CS-YSCVNKSMLNSHLKSHSNVYQYRCA-NCTYATKYCHSLKLHLRK 66


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +3

Query: 555 YKRKQSNKVNSYQSEYFNEVEDER-PMLLPGQQNLARPFPPPP 680
           Y    +N  N+Y+  Y+N +  E+ P+ +P        FPP P
Sbjct: 338 YNNYNNNNYNNYKKLYYNIINIEQIPVPVPVPIYCGN-FPPRP 379


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 305 PEETEGFYNRPQGRG 349
           PEE +G   RP GRG
Sbjct: 124 PEEDDGGQPRPPGRG 138


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 135 PQYNKHIFNDSQRNYHKH 82
           P  N + +N++  NY+KH
Sbjct: 87  PLSNNYNYNNNYNNYNKH 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,415
Number of Sequences: 438
Number of extensions: 5605
Number of successful extensions: 45
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)