Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I08
(812 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g37340.1 68417.m05289 cytochrome P450 family protein Similar ... 31 0.91
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 2.8
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 2.8
At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical ... 29 2.8
At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical ... 29 2.8
At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical ... 29 2.8
At3g16760.2 68416.m02140 tetratricopeptide repeat (TPR)-containi... 29 3.7
At3g16760.1 68416.m02139 tetratricopeptide repeat (TPR)-containi... 29 3.7
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 29 3.7
At5g24620.1 68418.m02908 thaumatin-like protein, putative simila... 29 4.9
At1g07560.1 68414.m00809 leucine-rich repeat protein kinase, put... 29 4.9
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 28 6.4
At2g26410.1 68415.m03169 calmodulin-binding family protein simil... 28 6.4
At1g61080.1 68414.m06877 proline-rich family protein 28 6.4
At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein ... 28 6.4
>At4g37340.1 68417.m05289 cytochrome P450 family protein Similar to
Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
Length = 500
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 63 N*FTFANVCDSFFVNH*KYVCCTVVTAGSGSEWREI 170
N AN +S H Y C TVVTA G WR +
Sbjct: 93 NDVVLANRFNSLASKHISYGCTTVVTASYGDHWRNL 128
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +3
Query: 627 PMLLPGQQNLARPFPPPPASEINGVLGPGPAHQVGLLGPFDTPXGFXVGPKTXR 788
P+ P + A P PPP + G GP P G GP P +GPK R
Sbjct: 373 PVPAPQMPSSAGPPRPPPPAPPPGSGGPKPPPPPGPKGP-RPPPPMSLGPKAPR 425
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +3
Query: 627 PMLLPGQQNLARPFPPPPASEINGVLGPGPAHQVGLLGPFDTPXGFXVGPKTXR 788
P+ P + A P PPP + G GP P G GP P +GPK R
Sbjct: 373 PVPAPQMPSSAGPPRPPPPAPPPGSGGPKPPPPPGPKGP-RPPPPMSLGPKAPR 425
>At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical to
protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
Length = 453
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +3
Query: 597 EYFNEVEDERPMLLPGQQ-NLARPF--PPPPASEINGVLGPGPAHQVGLLGPFDTPXGFX 767
E+ + + D+RP P + A P PPPP + L GP GL+ F P F
Sbjct: 10 EFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFY 69
Query: 768 VG-PKTXRKRWXP 803
G P+ W P
Sbjct: 70 NGLPRQGSPPWRP 82
>At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical to
protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
Length = 467
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +3
Query: 597 EYFNEVEDERPMLLPGQQ-NLARPF--PPPPASEINGVLGPGPAHQVGLLGPFDTPXGFX 767
E+ + + D+RP P + A P PPPP + L GP GL+ F P F
Sbjct: 24 EFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFY 83
Query: 768 VG-PKTXRKRWXP 803
G P+ W P
Sbjct: 84 NGLPRQGSPPWRP 96
>At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical to
protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
Length = 467
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +3
Query: 597 EYFNEVEDERPMLLPGQQ-NLARPF--PPPPASEINGVLGPGPAHQVGLLGPFDTPXGFX 767
E+ + + D+RP P + A P PPPP + L GP GL+ F P F
Sbjct: 24 EFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFY 83
Query: 768 VG-PKTXRKRWXP 803
G P+ W P
Sbjct: 84 NGLPRQGSPPWRP 96
>At3g16760.2 68416.m02140 tetratricopeptide repeat (TPR)-containing
protein low similarity to TPR-containing protein
involved in spermatogenesis TPIS [Mus musculus]
GI:6272682; contains Pfam profile PF00515:
tetratricopeptide repeat (TPR) domain
Length = 456
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +3
Query: 573 NKVNSYQSEYFNEVEDERPMLLPGQQNLARPFPPPPASEINGVLGPGPAHQVG 731
N S S Y + RP PG+ + P P S I +G GP VG
Sbjct: 31 NGQKSQTSSYSSSNSQPRPAWQPGKPSWTHQ-PAPKQSTIRSEIGSGPTSMVG 82
>At3g16760.1 68416.m02139 tetratricopeptide repeat (TPR)-containing
protein low similarity to TPR-containing protein
involved in spermatogenesis TPIS [Mus musculus]
GI:6272682; contains Pfam profile PF00515:
tetratricopeptide repeat (TPR) domain
Length = 475
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +3
Query: 573 NKVNSYQSEYFNEVEDERPMLLPGQQNLARPFPPPPASEINGVLGPGPAHQVG 731
N S S Y + RP PG+ + P P S I +G GP VG
Sbjct: 31 NGQKSQTSSYSSSNSQPRPAWQPGKPSWTHQ-PAPKQSTIRSEIGSGPTSMVG 82
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 582 NSYQSEYFNEVEDERPMLLPGQQNLARPFPPPP 680
+S + +F +D++ LLP + A P PPPP
Sbjct: 5 SSSAASFFGVRQDDQSHLLPPNSSAAAPPPPPP 37
>At5g24620.1 68418.m02908 thaumatin-like protein, putative similar
to thaumatin-like protein [Arabidopsis thaliana]
GI:2435406; contains Pfam profile PF00314: Thaumatin
family
Length = 420
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 639 PGQQNLARPFPPPPASEINGVLGPGPAHQVG--LLGPFDTPXGFXVGPKT 782
P Q L +P PP ++ + P P +Q G + P G + P T
Sbjct: 267 PPQNQLGQPMAPPTQNQYGQPMAPAPQYQYGQPMAPPTQNQYGQPLAPPT 316
>At1g07560.1 68414.m00809 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 856
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/105 (23%), Positives = 42/105 (40%)
Frame = +3
Query: 147 SGSEWREIPVPRXNSLQRLCV*TQKLNSLTAAVTMSDPTVNPRCKQTRSRFVNQKKLKAS 326
+G+ I +PR SLQ V T L +A+ + N Q+ S + +
Sbjct: 143 NGTRAEIIHIPRSTSLQICLVKTGTTTPLISALELRPLRNNTYIPQSGSL---KTLFRVH 199
Query: 327 ITDPRXEGRYPVRVEEHAQSPYRVQGQAVLTVDVPKDYDSDGTLD 461
+TD + RYP V + SP+ + +L + + D D
Sbjct: 200 LTDSKETVRYPEDVHDRLWSPFFMPEWRLLRTSLTVNTSDDNGYD 244
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +3
Query: 639 PGQQNLARPFPPPPASEINGVLGPGPAHQVGLLGPFDTPXGFXVGP 776
P +ARP PPPPA+ + PG QV G F P G V P
Sbjct: 78 PRPSPMARPGPPPPAA----MARPGGPPQVSQPGGF-PPVGRPVAP 118
>At2g26410.1 68415.m03169 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 516
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 558 KRKQS-NKVNSYQSEYFNEVEDERPMLLPGQQNLARPFPPPP 680
KRK S K S +S F+ +E P + P ++ RP+PPPP
Sbjct: 18 KRKWSFGKQKSRES--FDFPLEETPPVDPSPSSVHRPYPPPP 57
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 627 PMLLPGQQNLARPFPPPPASEINGVLGPGP 716
P +P P PPPP + NG GP P
Sbjct: 594 PPPMPLANGATPPPPPPPMAMANGAAGPPP 623
>At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein /
YT521-B-like family protein low similarity to cleavage
and polyadenylation specificity factor 30 kDa subunit
[Bos taurus] GI:2327052; contains Pfam profiles PF00642:
Zinc finger C-x8-C-x5-C-x3-H type (and similar),
PF04146: YT521-B-like family; supporting cDNA
gi|24415581|gb|AY140901.1|
Length = 678
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 624 RPMLLPGQQNLARPFPPPPASE--INGVLGPGPAHQVGLLGPFDTPXGFXVGPK 779
R ++ P Q L R P P GV+GPG A G G P F +GP+
Sbjct: 491 RGIMWPPQMPLGRGIRPMPGMGGFPLGVMGPGDAFPYGPGGYNGMPDPFGMGPR 544
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,056,344
Number of Sequences: 28952
Number of extensions: 399153
Number of successful extensions: 1351
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1853336000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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